CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-004756
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Respiratory nitrate reductase 2 beta chain 
Protein Synonyms/Alias
  
Gene Name
 narY 
Gene Synonyms/Alias
 b1467; JW1462 
Created Date
 July 27, 2013 
Organism
 Escherichia coli (strain K12) 
NCBI Taxa ID
 83333 
Lysine Modification
Position
Peptide
Type
References
337YKMAMDWKLALPLHPacetylation[1]
Reference
 [1] Acetyl-Phosphate Is a Critical Determinant of Lysine Acetylation in E. coli.
 Weinert BT, Iesmantavicius V, Wagner SA, Schölz C, Gummesson B, Beli P, Nyström T, Choudhary C.
 Mol Cell. 2013 Jul 25;51(2):265-72. [PMID: 23830618
Functional Description
 This is a second nitrate reductase enzyme which can substitute for the NRA enzyme and allows E.coli to use nitrate as an electron acceptor during anaerobic growth. The beta chain is an electron transfer unit containing four cysteine clusters involved in the formation of iron-sulfur centers. Electrons are transferred from the gamma chain to the molybdenum cofactor of the alpha subunit. 
Sequence Annotation
 DOMAIN 7 35 4Fe-4S ferredoxin-type 1.
 DOMAIN 174 205 4Fe-4S ferredoxin-type 2.
 DOMAIN 207 236 4Fe-4S ferredoxin-type 3.
 METAL 16 16 Iron-sulfur 1 (4Fe-4S) (By similarity).
 METAL 19 19 Iron-sulfur 1 (4Fe-4S) (By similarity).
 METAL 22 22 Iron-sulfur 1 (4Fe-4S) (By similarity).
 METAL 26 26 Iron-sulfur 2 (4Fe-4S) (By similarity).
 METAL 183 183 Iron-sulfur 3 (4Fe-4S) (By similarity).
 METAL 186 186 Iron-sulfur 3 (4Fe-4S) (By similarity).
 METAL 191 191 Iron-sulfur 3 (4Fe-4S) (By similarity).
 METAL 195 195 Iron-sulfur 4 (3Fe-4S) (By similarity).
 METAL 216 216 Iron-sulfur 4 (3Fe-4S) (By similarity).
 METAL 222 222 Iron-sulfur 4 (3Fe-4S) (By similarity).
 METAL 226 226 Iron-sulfur 3 (4Fe-4S) (By similarity).
 METAL 243 243 Iron-sulfur 2 (4Fe-4S) (By similarity).
 METAL 246 246 Iron-sulfur 2 (4Fe-4S) (By similarity).
 METAL 258 258 Iron-sulfur 2 (4Fe-4S) (By similarity).
 METAL 262 262 Iron-sulfur 1 (4Fe-4S) (By similarity).  
Keyword
 3Fe-4S; 4Fe-4S; Cell membrane; Complete proteome; Direct protein sequencing; Electron transport; Iron; Iron-sulfur; Membrane; Metal-binding; Nitrate assimilation; Oxidoreductase; Reference proteome; Repeat; Transport. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 514 AA 
Protein Sequence
MKIRSQVGMV LNLDKCIGCH TCSVTCKNVW TGREGMEYAW FNNVETKPGI GYPKNWEDQE 60
EWQGGWVRDV NGKIRPRLGN KMGVITKIFA NPVVPQIDDY YEPFTFDYEH LHSAPEGKHI 120
PTARPRSLID GKRMDKVIWG PNWEELLGGE FEKRARDRNF EAMQKEMYGQ FENTFMMYLP 180
RLCEHCLNPS CVATCPSGAI YKREEDGIVL IDQDKCRGWR LCISGCPYKK IYFNWKSGKS 240
EKCIFCYPRI ESGQPTVCSE TCVGRIRYLG VLLYDADRIE EAASTEREVD LYERQCEVFL 300
DPHDPSVIEE ALKQGIPQNV IDAAQRSPVY KMAMDWKLAL PLHPEYRTLP MVWYVPPLSP 360
IQSYADAGGL PKSEGVLPAI ESLRIPVQYL ANMLSAGDTG PVLRALKRMM AMRHYMRSQT 420
VEGVTDTRAI DEVGLSVAQV EEMYRYLAIA NYEDRFVIPT SHREMAGDAF AERNGCGFTF 480
GDGCHGSDSK FNLFNSSRID AINITEVRDK AEGE 514 
Gene Ontology
 GO:0009325; C:nitrate reductase complex; IEA:InterPro.
 GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
 GO:0051538; F:3 iron, 4 sulfur cluster binding; IPI:EcoCyc.
 GO:0051539; F:4 iron, 4 sulfur cluster binding; IPI:EcoCyc.
 GO:0009055; F:electron carrier activity; IDA:EcoCyc.
 GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
 GO:0008940; F:nitrate reductase activity; IEA:EC.
 GO:0009061; P:anaerobic respiration; IDA:EcoCyc.
 GO:0022900; P:electron transport chain; IEA:UniProtKB-KW.
 GO:0042128; P:nitrate assimilation; IEA:UniProtKB-KW.
 GO:0006974; P:response to DNA damage stimulus; IEP:EcoliWiki. 
Interpro
 IPR017896; 4Fe4S_Fe-S-bd.
 IPR006547; NO3_Rdtase_bsu. 
Pfam
 PF13247; Fer4_11 
SMART
  
PROSITE
 PS00198; 4FE4S_FER_1
 PS51379; 4FE4S_FER_2 
PRINTS