CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-002289
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 40S ribosomal protein S21 
Protein Synonyms/Alias
  
Gene Name
 Rps21 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Rattus norvegicus (Rat) 
NCBI Taxa ID
 10116 
Lysine Modification
Position
Peptide
Type
References
81KADGIVSKNF*****ubiquitination[1]
Reference
 [1] Synaptic protein ubiquitination in rat brain revealed by antibody-based ubiquitome analysis.
 Na CH, Jones DR, Yang Y, Wang X, Xu Y, Peng J.
 J Proteome Res. 2012 Sep 7;11(9):4722-32. [PMID: 22871113
Functional Description
  
Sequence Annotation
 MOD_RES 1 1 N-acetylmethionine.
 MOD_RES 81 81 N6-acetyllysine (By similarity).  
Keyword
 Acetylation; Complete proteome; Direct protein sequencing; Reference proteome; Ribonucleoprotein; Ribosomal protein. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 83 AA 
Protein Sequence
MQNDAGEFVD LYVPRKCSAS NRIIAAKDHA SIQMNVAEVD RSTGRFNGQF KTYGICGAIR 60
RMGESDDSIL RLAKADGIVS KNF 83 
Gene Ontology
 GO:0022627; C:cytosolic small ribosomal subunit; IDA:RGD.
 GO:0043022; F:ribosome binding; ISS:UniProtKB.
 GO:0003735; F:structural constituent of ribosome; IBA:RefGenome.
 GO:0000447; P:endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IBA:RefGenome.
 GO:0000461; P:endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IBA:RefGenome.
 GO:0006414; P:translational elongation; IBA:RefGenome. 
Interpro
 IPR001931; Ribosomal_S21e.
 IPR018279; Ribosomal_S21e_CS. 
Pfam
 PF01249; Ribosomal_S21e 
SMART
  
PROSITE
 PS00996; RIBOSOMAL_S21E 
PRINTS