CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-030919
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Citrate synthase 
Protein Synonyms/Alias
  
Gene Name
 CS 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
21SASSTNLKDILADLIubiquitination[1]
30ILADLIPKEQARIKTacetylation[2]
30ILADLIPKEQARIKTubiquitination[1, 3]
63YGGMRGMKGLVYETSacetylation[2]
63YGGMRGMKGLVYETSubiquitination[1, 4]
90FSIPECQKLLPKAKGacetylation[2, 5, 6]
90FSIPECQKLLPKAKGubiquitination[3, 4, 6]
308QLQKEVGKDVSDEKLacetylation[2, 5]
314GKDVSDEKLRDYIWNacetylation[5, 6]
314GKDVSDEKLRDYIWNubiquitination[3]
353CQREFALKHLPNDPMacetylation[2, 5]
353CQREFALKHLPNDPMubiquitination[1, 4]
362LPNDPMFKLVAQLYKacetylation[2, 5]
369KLVAQLYKIVPNVLLacetylation[2, 5]
369KLVAQLYKIVPNVLLubiquitination[1, 3, 4, 7]
380NVLLEQGKAKNPWPNubiquitination[1]
382LLEQGKAKNPWPNVDubiquitination[4]
437GFPLERPKSMSTEGLacetylation[6]
437GFPLERPKSMSTEGLubiquitination[1]
446MSTEGLMKFVDSKSGacetylation[2, 5]
446MSTEGLMKFVDSKSGubiquitination[3]
Reference
 [1] Landscape of the PARKIN-dependent ubiquitylome in response to mitochondrial depolarization.
 Sarraf SA, Raman M, Guarani-Pereira V, Sowa ME, Huttlin EL, Gygi SP, Harper JW.
 Nature. 2013 Apr 18;496(7445):372-6. [PMID: 23503661]
 [2] Proteomic investigations of lysine acetylation identify diverse substrates of mitochondrial deacetylase sirt3.
 Sol EM, Wagner SA, Weinert BT, Kumar A, Kim HS, Deng CX, Choudhary C.
 PLoS One. 2012;7(12):e50545. [PMID: 23236377]
 [3] A proteome-wide, quantitative survey of in vivo ubiquitylation sites reveals widespread regulatory roles.
 Wagner SA, Beli P, Weinert BT, Nielsen ML, Cox J, Mann M, Choudhary C.
 Mol Cell Proteomics. 2011 Oct;10(10):M111.013284. [PMID: 21890473]
 [4] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961]
 [5] Proteomic investigations reveal a role for RNA processing factor THRAP3 in the DNA damage response.
 Beli P, Lukashchuk N, Wagner SA, Weinert BT, Olsen JV, Baskcomb L, Mann M, Jackson SP, Choudhary C.
 Mol Cell. 2012 Apr 27;46(2):212-25. [PMID: 22424773]
 [6] Integrated proteomic analysis of post-translational modifications by serial enrichment.
 Mertins P, Qiao JW, Patel J, Udeshi ND, Clauser KR, Mani DR, Burgess MW, Gillette MA, Jaffe JD, Carr SA.
 Nat Methods. 2013 Jul;10(7):634-7. [PMID: 23749302]
 [7] A data set of human endogenous protein ubiquitination sites.
 Shi Y, Chan DW, Jung SY, Malovannaya A, Wang Y, Qin J.
 Mol Cell Proteomics. 2011 May;10(5):M110.002089. [PMID: 20972266
Functional Description
  
Sequence Annotation
  
Keyword
 Complete proteome; Reference proteome; Transferase. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 453 AA 
Protein Sequence
MNASCLVLAA RHASASSTNL KDILADLIPK EQARIKTFRQ QHGKTVVGQI TVDMMYGGMR 60
GMKGLVYETS VLDPDEGIRF RGFSIPECQK LLPKAKGGEE PLPEGLFWLL VTGHIPTEEQ 120
VSWLSKEWAK RAALPSHVVT MLDNFPTNLH PMSQLSAAVT ALNSESNFAR AYAQGISRTK 180
YWELIYEDSM DLIAKLPCVA AKIYRNLYRE GSGIGAIDSN LDWSHNFTNM LGYTDHQFTE 240
LTRLYLTIHS DHEGGNVSAH TSHLVGSALS DPYLSFAAAM NGLAGPLHGL ANQEVLVWLT 300
QLQKEVGKDV SDEKLRDYIW NTLNSGRVVP GYGHAVLRKT DPRYTCQREF ALKHLPNDPM 360
FKLVAQLYKI VPNVLLEQGK AKNPWPNVDA HSGVLLQYYG MTEMNYYTVL FGVSRALGVL 420
AQLIWSRALG FPLERPKSMS TEGLMKFVDS KSG 453 
Gene Ontology
 GO:0005739; C:mitochondrion; IDA:HPA.
 GO:0004108; F:citrate (Si)-synthase activity; IEA:InterPro.
 GO:0044262; P:cellular carbohydrate metabolic process; IEA:InterPro.
 GO:0006099; P:tricarboxylic acid cycle; IEA:InterPro. 
Interpro
 IPR016142; Citrate_synth-like_lrg_a-sub.
 IPR002020; Citrate_synthase-like.
 IPR016141; Citrate_synthase-like_core.
 IPR019810; Citrate_synthase_AS.
 IPR010109; Citrate_synthase_euk. 
Pfam
 PF00285; Citrate_synt 
SMART
  
PROSITE
 PS00480; CITRATE_SYNTHASE 
PRINTS
 PR00143; CITRTSNTHASE.