CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-043790
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
  
Protein Name
 T-cell surface glycoprotein CD1b 
Protein Synonyms/Alias
  
Gene Name
 CD1B 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
113GLDFLSVKNASCVPSubiquitination[1]
164LGVLNAGKADLQRQVubiquitination[1, 2]
172ADLQRQVKPEAWLSSubiquitination[1, 3]
Reference
 [1] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961]
 [2] Methods for quantification of in vivo changes in protein ubiquitination following proteasome and deubiquitinase inhibition.
 Udeshi ND, Mani DR, Eisenhaure T, Mertins P, Jaffe JD, Clauser KR, Hacohen N, Carr SA.
 Mol Cell Proteomics. 2012 May;11(5):148-59. [PMID: 22505724]
 [3] Integrated proteomic analysis of post-translational modifications by serial enrichment.
 Mertins P, Qiao JW, Patel J, Udeshi ND, Clauser KR, Mani DR, Burgess MW, Gillette MA, Jaffe JD, Carr SA.
 Nat Methods. 2013 Jul;10(7):634-7. [PMID: 23749302] 
Functional Description
  
Sequence Annotation
  
Keyword
 Complete proteome; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 246 AA 
Protein Sequence
XSSFTNSTWA QTQGSGWLDD LQIHGWDSDS GTAIFLKPWS KGNFSDKEVA ELEEIFRVYI 60
FGFAREVQDF AGDFQMKYPF EIQGIAGCEL HSGGAIVSFL RGALGGLDFL SVKNASCVPS 120
PEGGSRAQKF CALIIQYQGI METVRILLYE TCPRYLLGVL NAGKADLQRQ VKPEAWLSSG 180
PSPGPGRLQL VCHVSGFYPK PVWVMWMRGN PTSIGSIVLA IIVPSLLLLL CLALWYMRRR 240
SYQNIP 246 
Gene Ontology
 GO:0016020; C:membrane; IEA:InterPro.
 GO:0019882; P:antigen processing and presentation; IEA:InterPro.
 GO:0006955; P:immune response; IEA:InterPro. 
Interpro
 IPR013783; Ig-like_fold.
 IPR003597; Ig_C1-set.
 IPR011161; MHC_I-like_Ag-recog.
 IPR011162; MHC_I/II-like_Ag-recog. 
Pfam
 PF07654; C1-set 
SMART
  
PROSITE
  
PRINTS