CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-031448
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Serine/threonine-protein kinase Nek2 
Protein Synonyms/Alias
 cDNA FLJ53945, highly similar to Serine/threonine-protein kinase Nek2 (EC 2.7.11.1) 
Gene Name
 NEK2 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
20VNLLRELKHPNIVRYubiquitination[1]
100TVLHRDLKPANVFLDubiquitination[1, 2]
109ANVFLDGKQNVKLGDubiquitination[1, 2, 3]
113LDGKQNVKLGDFGLAubiquitination[1, 2, 3]
131NHDTSFAKTFVGTPYubiquitination[1, 3]
184SQKELAGKIREGKFRubiquitination[1]
252RQLGEPEKSQDSSPVubiquitination[1]
266VLSELKLKEIQLQERubiquitination[1]
287REERLEQKEQELCVRubiquitination[1]
301RERLAEDKLARAENLubiquitination[1]
310ARAENLLKNYSLLKEubiquitination[1, 3]
316LKNYSLLKERKFLSLubiquitination[1, 3]
319YSLLKERKFLSLASNubiquitination[1, 4]
338NLPSSVIKKKVHFSGubiquitination[3, 5]
339LPSSVIKKKVHFSGEubiquitination[1]
348VHFSGESKENIMRSEubiquitination[1, 2, 3, 5, 6]
364SESQLTSKSKCKDLKubiquitination[1, 2, 3, 5]
394IEKNYQLKSRQILGMubiquitination[1]
Reference
 [1] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961]
 [2] Systematic and quantitative assessment of the ubiquitin-modified proteome.
 Kim W, Bennett EJ, Huttlin EL, Guo A, Li J, Possemato A, Sowa ME, Rad R, Rush J, Comb MJ, Harper JW, Gygi SP.
 Mol Cell. 2011 Oct 21;44(2):325-40. [PMID: 21906983]
 [3] Global identification of modular cullin-RING ligase substrates.
 Emanuele MJ, Elia AE, Xu Q, Thoma CR, Izhar L, Leng Y, Guo A, Chen YN, Rush J, Hsu PW, Yen HC, Elledge SJ.
 Cell. 2011 Oct 14;147(2):459-74. [PMID: 21963094]
 [4] A proteome-wide, quantitative survey of in vivo ubiquitylation sites reveals widespread regulatory roles.
 Wagner SA, Beli P, Weinert BT, Nielsen ML, Cox J, Mann M, Choudhary C.
 Mol Cell Proteomics. 2011 Oct;10(10):M111.013284. [PMID: 21890473]
 [5] Landscape of the PARKIN-dependent ubiquitylome in response to mitochondrial depolarization.
 Sarraf SA, Raman M, Guarani-Pereira V, Sowa ME, Huttlin EL, Gygi SP, Harper JW.
 Nature. 2013 Apr 18;496(7445):372-6. [PMID: 23503661]
 [6] Integrated proteomic analysis of post-translational modifications by serial enrichment.
 Mertins P, Qiao JW, Patel J, Udeshi ND, Clauser KR, Mani DR, Burgess MW, Gillette MA, Jaffe JD, Carr SA.
 Nat Methods. 2013 Jul;10(7):634-7. [PMID: 23749302
Functional Description
  
Sequence Annotation
  
Keyword
 Complete proteome; Kinase; Reference proteome; Transferase. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 402 AA 
Protein Sequence
MTEAEKQMLV SEVNLLRELK HPNIVRYYDR IIDRTNTTLY IVMEYCEGGD LASVITKGTK 60
ERQYLDEEFV LRVMTQLTLA LKECHRRSDG GHTVLHRDLK PANVFLDGKQ NVKLGDFGLA 120
RILNHDTSFA KTFVGTPYYM SPEQMNRMSY NEKSDIWSLG CLLYELCALM PPFTAFSQKE 180
LAGKIREGKF RRIPYRYSDE LNEIITRMLN LKDYHRPSVE EILENPLIAD LVADEQRRNL 240
ERRGRQLGEP EKSQDSSPVL SELKLKEIQL QERERALKAR EERLEQKEQE LCVRERLAED 300
KLARAENLLK NYSLLKERKF LSLASNPELL NLPSSVIKKK VHFSGESKEN IMRSENSESQ 360
LTSKSKCKDL KKRLHAAQLR AQALSDIEKN YQLKSRQILG MR 402 
Gene Ontology
 GO:0000794; C:condensed nuclear chromosome; IEA:Compara.
 GO:0030496; C:midbody; IEA:Compara.
 GO:0000922; C:spindle pole; IEA:Compara.
 GO:0005524; F:ATP binding; IEA:InterPro.
 GO:0004674; F:protein serine/threonine kinase activity; IEA:InterPro.
 GO:0001824; P:blastocyst development; IEA:Compara.
 GO:0000070; P:mitotic sister chromatid segregation; IEA:Compara.
 GO:0043392; P:negative regulation of DNA binding; IEA:Compara.
 GO:0090307; P:spindle assembly involved in mitosis; IEA:Compara. 
Interpro
 IPR011009; Kinase-like_dom.
 IPR000719; Prot_kinase_cat_dom.
 IPR008271; Ser/Thr_kinase_AS. 
Pfam
 PF00069; Pkinase 
SMART
  
PROSITE
 PS50011; PROTEIN_KINASE_DOM
 PS00108; PROTEIN_KINASE_ST 
PRINTS