CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-041725
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Protein Tdrkh 
Protein Synonyms/Alias
 RCG51933, isoform CRA_a 
Gene Name
 Tdrkh 
Gene Synonyms/Alias
 rCG_51933 
Created Date
 July 27, 2013 
Organism
 Rattus norvegicus (Rat) 
NCBI Taxa ID
 10116 
Lysine Modification
Position
Peptide
Type
References
478LYDTSNGKKLDIGLEacetylation[1]
Reference
 [1] Proteomic analysis of lysine acetylation sites in rat tissues reveals organ specificity and subcellular patterns.
 Lundby A, Lage K, Weinert BT, Bekker-Jensen DB, Secher A, Skovgaard T, Kelstrup CD, Dmytriyev A, Choudhary C, Lundby C, Olsen JV.
 Cell Rep. 2012 Aug 30;2(2):419-31. [PMID: 22902405] 
Functional Description
  
Sequence Annotation
  
Keyword
 Complete proteome; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 560 AA 
Protein Sequence
MSTERTSWTN LSTIQKIALG LGIPASATVA YILYRRYRES REERLTFVGE DDIEIEMRVP 60
QEAVKLIIGR QGANIKQLRK QTGARIDVDT EDVGDERVLL ISGFPVQVCK AKAAIHQILT 120
ENTPVFEQLS VPQRSVGRII GRGGETIRSI CKASGAKITC DKESEGTLLL SRLIKISGTQ 180
KEVAAAKHLI LEKVSEDEEL RKRIAHSAET RVPRKQPISV RREEVTEPGG AGEAALWKNT 240
NSSMGPAAPL EVPLRKGGGD MVVVGPKEGS WEKPNDDSFQ NSGAQSSPET SMFEIPSPDF 300
SFHADEYLEV YVSASEHPNH FWIQIIGSRS LQLDKLVSEM TQHYENSLPE DLTVHVGDIV 360
AAPLSTNGSW YRARVLGTLE NGNLDLYFVD FGDNGDCPLK DLRALRSDFL SLPFQAIECS 420
LARIAPSGEE WEEEALDEFD RLTHCADWKP LVAKISSYVQ TGISTWPKVY LYDTSNGKKL 480
DIGLELVRKG YAVELPEDME ENRTVPDMLK DMATETDDSL ASILTETKKS PEEIPHTLSC 540
LSLSEAASMS GDDNLEDDLF 560 
Gene Ontology
 GO:0005739; C:mitochondrion; IEA:Compara.
 GO:0003723; F:RNA binding; IEA:InterPro. 
Interpro
 IPR004087; KH_dom.
 IPR004088; KH_dom_type_1.
 IPR002999; Tudor. 
Pfam
 PF00013; KH_1
 PF00567; TUDOR 
SMART
 SM00322; KH
 SM00333; TUDOR 
PROSITE
 PS50084; KH_TYPE_1
 PS50304; TUDOR 
PRINTS