CPLM 1.0 - Compendium of Protein Lysine ModificationTag | Content |
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CPLM ID | CPLM-003878 | UniProt Accession | | Genbank Protein ID | | Genbank Nucleotide ID | | Protein Name | Heat shock cognate 71 kDa protein | Protein Synonyms/Alias | Heat shock 70 kDa protein 8 | Gene Name | HSPA8 | Gene Synonyms/Alias | HSC70; HSP73; HSPA10 | Created Date | July 27, 2013 | Organism | Homo sapiens (Human) | NCBI Taxa ID | 9606 | Lysine Modification | Position | Peptide | Type | References |
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3 | *****MSKGPAVGID | ubiquitination | [1, 2, 3] | 56 | RLIGDAAKNQVAMNP | ubiquitination | [1, 2, 3, 4, 5, 6, 7] | 71 | TNTVFDAKRLIGRRF | ubiquitination | [1, 2, 3, 4, 6, 7, 8] | 88 | AVVQSDMKHWPFMVV | acetylation | [9] | 88 | AVVQSDMKHWPFMVV | ubiquitination | [1, 2, 3, 4, 7] | 108 | PKVQVEYKGETKSFY | acetylation | [9] | 108 | PKVQVEYKGETKSFY | ubiquitination | [2, 3, 4, 6, 7, 8] | 112 | VEYKGETKSFYPEEV | ubiquitination | [1, 3, 4, 7] | 126 | VSSMVLTKMKEIAEA | ubiquitination | [1, 2, 3, 4, 6, 7, 10] | 128 | SMVLTKMKEIAEAYL | ubiquitination | [2, 3, 4, 7] | 137 | IAEAYLGKTVTNAVV | ubiquitination | [1, 3, 4, 5, 7] | 159 | DSQRQATKDAGTIAG | ubiquitination | [1, 2, 3, 4, 5, 6, 7] | 187 | AIAYGLDKKVGAERN | ubiquitination | [1, 2, 3, 4, 5, 7] | 188 | IAYGLDKKVGAERNV | ubiquitination | [2, 3, 4, 5, 7] | 246 | NHFIAEFKRKHKKDI | acetylation | [9] | 246 | NHFIAEFKRKHKKDI | ubiquitination | [1, 2, 3, 4, 5, 6, 7] | 248 | FIAEFKRKHKKDISE | ubiquitination | [3] | 251 | EFKRKHKKDISENKR | ubiquitination | [4] | 257 | KKDISENKRAVRRLR | ubiquitination | [1, 2, 4] | 319 | GTLDPVEKALRDAKL | acetylation | [9] | 319 | GTLDPVEKALRDAKL | ubiquitination | [1, 2, 3, 4, 5, 6, 7] | 325 | EKALRDAKLDKSQIH | ubiquitination | [2, 3, 4, 7, 11] | 328 | LRDAKLDKSQIHDIV | ubiquitination | [1, 2, 3, 4, 6, 7] | 345 | GGSTRIPKIQKLLQD | ubiquitination | [3, 7] | 348 | TRIPKIQKLLQDFFN | acetylation | [9, 12] | 348 | TRIPKIQKLLQDFFN | ubiquitination | [1, 2, 3, 4, 6, 7, 8] | 357 | LQDFFNGKELNKSIN | ubiquitination | [1, 2, 3, 4, 7] | 361 | FNGKELNKSINPDEA | ubiquitination | [1, 3, 4, 5, 7] | 423 | RNTTIPTKQTQTFTT | ubiquitination | [1, 3, 4, 5, 6, 7] | 451 | EGERAMTKDNNLLGK | ubiquitination | [1, 3, 4, 5, 6, 7] | 458 | KDNNLLGKFELTGIP | ubiquitination | [1, 4, 6, 7] | 497 | AVDKSTGKENKITIT | ubiquitination | [3, 6, 7] | 500 | KSTGKENKITITNDK | ubiquitination | [3, 4, 6, 7] | 507 | KITITNDKGRLSKED | ubiquitination | [2, 3, 4, 5, 6, 7, 8, 11] | 512 | NDKGRLSKEDIERMV | acetylation | [9] | 512 | NDKGRLSKEDIERMV | ubiquitination | [1, 2, 3, 4, 5, 6, 7, 11] | 524 | RMVQEAEKYKAEDEK | acetylation | [9] | 524 | RMVQEAEKYKAEDEK | ubiquitination | [1, 2, 3, 4, 5, 6, 7, 11] | 526 | VQEAEKYKAEDEKQR | ubiquitination | [3, 4, 7] | 531 | KYKAEDEKQRDKVSS | ubiquitination | [2, 4, 6, 7] | 535 | EDEKQRDKVSSKNSL | ubiquitination | [2] | 539 | QRDKVSSKNSLESYA | ubiquitination | [1, 2, 3, 4, 6, 7] | 550 | ESYAFNMKATVEDEK | ubiquitination | [4, 5, 7] | 557 | KATVEDEKLQGKIND | ubiquitination | [3, 4, 7] | 561 | EDEKLQGKINDEDKQ | ubiquitination | [4] | 573 | DKQKILDKCNEIINW | ubiquitination | [3, 4] | 583 | EIINWLDKNQTAEKE | ubiquitination | [1, 2, 3, 4, 6, 7] | 589 | DKNQTAEKEEFEHQQ | acetylation | [9] | 589 | DKNQTAEKEEFEHQQ | ubiquitination | [3, 4, 7] | 597 | EEFEHQQKELEKVCN | acetylation | [9] | 597 | EEFEHQQKELEKVCN | ubiquitination | [1, 3, 4, 5, 7] | 601 | HQQKELEKVCNPIIT | acetylation | [9] | 601 | HQQKELEKVCNPIIT | ubiquitination | [1, 3, 4, 5, 6, 7, 8] | 609 | VCNPIITKLYQSAGG | ubiquitination | [7] |
| Reference | [1] A proteome-wide, quantitative survey of in vivo ubiquitylation sites reveals widespread regulatory roles. Wagner SA, Beli P, Weinert BT, Nielsen ML, Cox J, Mann M, Choudhary C. Mol Cell Proteomics. 2011 Oct;10(10):M111.013284. [ PMID: 21890473] [2] Methods for quantification of in vivo changes in protein ubiquitination following proteasome and deubiquitinase inhibition. Udeshi ND, Mani DR, Eisenhaure T, Mertins P, Jaffe JD, Clauser KR, Hacohen N, Carr SA. Mol Cell Proteomics. 2012 May;11(5):148-59. [ PMID: 22505724] [3] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments. Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA. Mol Cell Proteomics. 2013 Mar;12(3):825-31. [ PMID: 23266961] [4] Systematic and quantitative assessment of the ubiquitin-modified proteome. Kim W, Bennett EJ, Huttlin EL, Guo A, Li J, Possemato A, Sowa ME, Rad R, Rush J, Comb MJ, Harper JW, Gygi SP. Mol Cell. 2011 Oct 21;44(2):325-40. [ PMID: 21906983] [5] Proteome-wide identification of ubiquitylation sites by conjugation of engineered lysine-less ubiquitin. Oshikawa K, Matsumoto M, Oyamada K, Nakayama KI. J Proteome Res. 2012 Feb 3;11(2):796-807. [ PMID: 22053931] [6] Systems-wide analysis of ubiquitylation dynamics reveals a key role for PAF15 ubiquitylation in DNA-damage bypass. Povlsen LK, Beli P, Wagner SA, Poulsen SL, Sylvestersen KB, Poulsen JW, Nielsen ML, Bekker-Jensen S, Mailand N, Choudhary C. Nat Cell Biol. 2012 Oct;14(10):1089-98. [ PMID: 23000965] [7] Landscape of the PARKIN-dependent ubiquitylome in response to mitochondrial depolarization. Sarraf SA, Raman M, Guarani-Pereira V, Sowa ME, Huttlin EL, Gygi SP, Harper JW. Nature. 2013 Apr 18;496(7445):372-6. [ PMID: 23503661] [8] Ubiquitin ligase substrate identification through quantitative proteomics at both the protein and peptide levels. Lee KA, Hammerle LP, Andrews PS, Stokes MP, Mustelin T, Silva JC, Black RA, Doedens JR. J Biol Chem. 2011 Dec 2;286(48):41530-8. [ PMID: 21987572] [9] Lysine acetylation targets protein complexes and co-regulates major cellular functions. Choudhary C, Kumar C, Gnad F, Nielsen ML, Rehman M, Walther TC, Olsen JV, Mann M. Science. 2009 Aug 14;325(5942):834-40. [ PMID: 19608861] [10] Global analysis of lysine ubiquitination by ubiquitin remnant immunoaffinity profiling. Xu G, Paige JS, Jaffrey SR. Nat Biotechnol. 2010 Aug;28(8):868-73. [ PMID: 20639865] [11] Mass spectrometric analysis of lysine ubiquitylation reveals promiscuity at site level. Danielsen JM, Sylvestersen KB, Bekker-Jensen S, Szklarczyk D, Poulsen JW, Horn H, Jensen LJ, Mailand N, Nielsen ML. Mol Cell Proteomics. 2011 Mar;10(3):M110.003590. [ PMID: 21139048] [12] Regulation of cellular metabolism by protein lysine acetylation. Zhao S, Xu W, Jiang W, Yu W, Lin Y, Zhang T, Yao J, Zhou L, Zeng Y, Li H, Li Y, Shi J, An W, Hancock SM, He F, Qin L, Chin J, Yang P, Chen X, Lei Q, Xiong Y, Guan KL. Science. 2010 Feb 19;327(5968):1000-4. [ PMID: 20167786] | Functional Description | Acts as a repressor of transcriptional activation. Inhibits the transcriptional coactivator activity of CITED1 on Smad-mediated transcription. Chaperone. Component of the PRP19- CDC5L complex that forms an integral part of the spliceosome and is required for activating pre-mRNA splicing. May have a scaffolding role in the spliceosome assembly as it contacts all other components of the core complex. | Sequence Annotation | REGION 186 377 Interaction with BAG1. MOD_RES 2 2 N-acetylserine. MOD_RES 15 15 Phosphotyrosine (By similarity). MOD_RES 41 41 Phosphotyrosine (By similarity). MOD_RES 153 153 Phosphoserine. MOD_RES 246 246 N6-acetyllysine. MOD_RES 319 319 N6-acetyllysine. MOD_RES 362 362 Phosphoserine. MOD_RES 561 561 N6,N6,N6-trimethyllysine; by METTL21A; in MOD_RES 589 589 N6-acetyllysine. MOD_RES 597 597 N6-acetyllysine. MOD_RES 601 601 N6-acetyllysine. | Keyword | 3D-structure; Acetylation; Alternative splicing; ATP-binding; Chaperone; Complete proteome; Cytoplasm; Direct protein sequencing; Host-virus interaction; Methylation; mRNA processing; mRNA splicing; Nucleotide-binding; Nucleus; Phosphoprotein; Polymorphism; Reference proteome; Repressor; Spliceosome; Stress response; Transcription; Transcription regulation; Ubl conjugation. | Sequence Source | UniProt (SWISSPROT/TrEMBL); GenBank; EMBL | Protein Length | 646 AA | Protein Sequence | MSKGPAVGID LGTTYSCVGV FQHGKVEIIA NDQGNRTTPS YVAFTDTERL IGDAAKNQVA 60 MNPTNTVFDA KRLIGRRFDD AVVQSDMKHW PFMVVNDAGR PKVQVEYKGE TKSFYPEEVS 120 SMVLTKMKEI AEAYLGKTVT NAVVTVPAYF NDSQRQATKD AGTIAGLNVL RIINEPTAAA 180 IAYGLDKKVG AERNVLIFDL GGGTFDVSIL TIEDGIFEVK STAGDTHLGG EDFDNRMVNH 240 FIAEFKRKHK KDISENKRAV RRLRTACERA KRTLSSSTQA SIEIDSLYEG IDFYTSITRA 300 RFEELNADLF RGTLDPVEKA LRDAKLDKSQ IHDIVLVGGS TRIPKIQKLL QDFFNGKELN 360 KSINPDEAVA YGAAVQAAIL SGDKSENVQD LLLLDVTPLS LGIETAGGVM TVLIKRNTTI 420 PTKQTQTFTT YSDNQPGVLI QVYEGERAMT KDNNLLGKFE LTGIPPAPRG VPQIEVTFDI 480 DANGILNVSA VDKSTGKENK ITITNDKGRL SKEDIERMVQ EAEKYKAEDE KQRDKVSSKN 540 SLESYAFNMK ATVEDEKLQG KINDEDKQKI LDKCNEIINW LDKNQTAEKE EFEHQQKELE 600 KVCNPIITKL YQSAGGMPGG MPGGFPGGGA PPSGGASSGP TIEEVD 646 | Gene Ontology | GO:0009986; C:cell surface; IDA:UniProtKB. GO:0061202; C:clathrin-sculpted gamma-aminobutyric acid transport vesicle membrane; TAS:Reactome. GO:0005829; C:cytosol; TAS:Reactome. GO:0070062; C:extracellular vesicular exosome; IDA:UniProtKB. GO:0042470; C:melanosome; IEA:UniProtKB-SubCell. GO:0005730; C:nucleolus; IDA:UniProtKB. GO:0005886; C:plasma membrane; TAS:Reactome. GO:0000974; C:Prp19 complex; IDA:UniProtKB. GO:0030529; C:ribonucleoprotein complex; IDA:UniProtKB. GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW. GO:0005524; F:ATP binding; IEA:UniProtKB-KW. GO:0042623; F:ATPase activity, coupled; NAS:UniProtKB. GO:0016044; P:cellular membrane organization; TAS:Reactome. GO:0051085; P:chaperone mediated protein folding requiring cofactor; IEA:Compara. GO:0010467; P:gene expression; TAS:Reactome. GO:0016071; P:mRNA metabolic process; TAS:Reactome. GO:0006397; P:mRNA processing; IEA:UniProtKB-KW. GO:0045892; P:negative regulation of transcription, DNA-dependent; IDA:UniProtKB. GO:0007269; P:neurotransmitter secretion; TAS:Reactome. GO:0006892; P:post-Golgi vesicle-mediated transport; TAS:Reactome. GO:0006457; P:protein folding; NAS:UniProtKB. GO:0051726; P:regulation of cell cycle; IEA:Compara. GO:0006986; P:response to unfolded protein; NAS:UniProtKB. GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. GO:0019048; P:virus-host interaction; IEA:UniProtKB-KW. | Interpro | | Pfam | | SMART | | PROSITE | | PRINTS | |
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