CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-003603
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Superoxide dismutase [Fe] 
Protein Synonyms/Alias
  
Gene Name
 sodB 
Gene Synonyms/Alias
 b1656; JW1648 
Created Date
 July 27, 2013 
Organism
 Escherichia coli (strain K12) 
NCBI Taxa ID
 83333 
Lysine Modification
Position
Peptide
Type
References
12LPALPYAKDALAPHIacetylation[1, 2]
30TIEYHYGKHHQTYVTacetylation[1, 2]
44TNLNNLIKGTAFEGKacetylation[1, 2]
44TNLNNLIKGTAFEGKpupylation[3]
51KGTAFEGKSLEEIIRacetylation[1, 2, 4]
117QFTDAAIKNFGSGWTacetylation[1, 2]
128SGWTWLVKNSDGKLAacetylation[1, 2]
Reference
 [1] Comprehensive profiling of protein lysine acetylation in Escherichia coli.
 Zhang K, Zheng S, Yang JS, Chen Y, Cheng Z.
 J Proteome Res. 2013 Feb 1;12(2):844-51. [PMID: 23294111]
 [2] Acetyl-Phosphate Is a Critical Determinant of Lysine Acetylation in E. coli.
 Weinert BT, Iesmantavicius V, Wagner SA, Schölz C, Gummesson B, Beli P, Nyström T, Choudhary C.
 Mol Cell. 2013 Jul 25;51(2):265-72. [PMID: 23830618]
 [3] Reconstitution of the Mycobacterium tuberculosis pupylation pathway in Escherichia coli.
 Cerda-Maira FA, McAllister F, Bode NJ, Burns KE, Gygi SP, Darwin KH.
 EMBO Rep. 2011 Jul 8;12(8):863-70. [PMID: 21738222]
 [4] Lysine acetylation is a highly abundant and evolutionarily conserved modification in Escherichia coli.
 Zhang J, Sprung R, Pei J, Tan X, Kim S, Zhu H, Liu CF, Grishin NV, Zhao Y.
 Mol Cell Proteomics. 2009 Feb;8(2):215-25. [PMID: 18723842
Functional Description
 Destroys superoxide anion radicals which are normally produced within the cells and which are toxic to biological systems. 
Sequence Annotation
 METAL 27 27 Iron.
 METAL 74 74 Iron.
 METAL 157 157 Iron.
 METAL 161 161 Iron.
 MOD_RES 51 51 N6-acetyllysine.  
Keyword
 3D-structure; Acetylation; Complete proteome; Direct protein sequencing; Iron; Metal-binding; Oxidoreductase; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 193 AA 
Protein Sequence
MSFELPALPY AKDALAPHIS AETIEYHYGK HHQTYVTNLN NLIKGTAFEG KSLEEIIRSS 60
EGGVFNNAAQ VWNHTFYWNC LAPNAGGEPT GKVAEAIAAS FGSFADFKAQ FTDAAIKNFG 120
SGWTWLVKNS DGKLAIVSTS NAGTPLTTDA TPLLTVDVWE HAYYIDYRNA RPGYLEHFWA 180
LVNWEFVAKN LAA 193 
Gene Ontology
 GO:0005829; C:cytosol; IDA:UniProtKB.
 GO:0016020; C:membrane; IDA:UniProtKB.
 GO:0005506; F:iron ion binding; IDA:EcoCyc.
 GO:0004784; F:superoxide dismutase activity; IDA:EcoCyc.
 GO:0019430; P:removal of superoxide radicals; IDA:EcoliWiki. 
Interpro
 IPR001189; Mn/Fe_SOD.
 IPR019833; Mn/Fe_SOD_BS.
 IPR019832; Mn/Fe_SOD_C.
 IPR019831; Mn/Fe_SOD_N. 
Pfam
 PF02777; Sod_Fe_C
 PF00081; Sod_Fe_N 
SMART
  
PROSITE
 PS00088; SOD_MN 
PRINTS
 PR01703; MNSODISMTASE.