CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-005244
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Methionyl-tRNA formyltransferase 
Protein Synonyms/Alias
  
Gene Name
 fmt 
Gene Synonyms/Alias
 yhdD; b3288; JW3249 
Created Date
 July 27, 2013 
Organism
 Escherichia coli (strain K12) 
NCBI Taxa ID
 83333 
Lysine Modification
Position
Peptide
Type
References
193QLADGTAKPEVQDETacetylation[1]
207TLVTYAEKLSKEEARacetylation[1]
210TYAEKLSKEEARIDWacetylation[1, 2]
Reference
 [1] Acetyl-Phosphate Is a Critical Determinant of Lysine Acetylation in E. coli.
 Weinert BT, Iesmantavicius V, Wagner SA, Schölz C, Gummesson B, Beli P, Nyström T, Choudhary C.
 Mol Cell. 2013 Jul 25;51(2):265-72. [PMID: 23830618]
 [2] Comprehensive profiling of protein lysine acetylation in Escherichia coli.
 Zhang K, Zheng S, Yang JS, Chen Y, Cheng Z.
 J Proteome Res. 2013 Feb 1;12(2):844-51. [PMID: 23294111
Functional Description
 Modifies the free amino group of the aminoacyl moiety of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by: (I) promoting its recognition by IF2 and (II) impairing its binding to EFTu-GTP. 
Sequence Annotation
 REGION 2 189 N-terminal domain.
 REGION 113 116 Tetrahydrofolate (THF) binding.
 REGION 210 315 C-terminal domain.  
Keyword
 3D-structure; Complete proteome; Direct protein sequencing; Protein biosynthesis; Reference proteome; Transferase. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 315 AA 
Protein Sequence
MSESLRIIFA GTPDFAARHL DALLSSGHNV VGVFTQPDRP AGRGKKLMPS PVKVLAEEKG 60
LPVFQPVSLR PQENQQLVAE LQADVMVVVA YGLILPKAVL EMPRLGCINV HGSLLPRWRG 120
AAPIQRSLWA GDAETGVTIM QMDVGLDTGD MLYKLSCPIT AEDTSGTLYD KLAELGPQGL 180
ITTLKQLADG TAKPEVQDET LVTYAEKLSK EEARIDWSLS AAQLERCIRA FNPWPMSWLE 240
IEGQPVKVWK ASVIDTATNA APGTILEANK QGIQVATGDG ILNLLSLQPA GKKAMSAQDL 300
LNSRREWFVP GNRLV 315 
Gene Ontology
 GO:0004479; F:methionyl-tRNA formyltransferase activity; IDA:EcoCyc.
 GO:0008168; F:methyltransferase activity; IEA:InterPro.
 GO:0032259; P:methylation; IEA:GOC. 
Interpro
 IPR005794; Fmt.
 IPR005793; Formyl_trans_C.
 IPR002376; Formyl_transf_N.
 IPR011034; Formyl_transferase_C-like.
 IPR001555; GART_AS.
 IPR015518; Met_tRNA_Form_TA-like. 
Pfam
 PF02911; Formyl_trans_C
 PF00551; Formyl_trans_N 
SMART
  
PROSITE
 PS00373; GART 
PRINTS