CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-024616
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 CDGSH iron-sulfur domain-containing protein 3, mitochondrial 
Protein Synonyms/Alias
 Melanoma nuclear protein 13 
Gene Name
 Cisd3 
Gene Synonyms/Alias
 Mel-13; Mel13 
Created Date
 July 27, 2013 
Organism
 Mus musculus (Mouse) 
NCBI Taxa ID
 10090 
Lysine Modification
Position
Peptide
Type
References
65RLELVAGKTYRWCVCacetylation[1]
65RLELVAGKTYRWCVCsuccinylation[1]
96RTGLSPLKFKAQETRacetylation[1, 2, 3, 4, 5]
96RTGLSPLKFKAQETRsuccinylation[1]
98GLSPLKFKAQETRTVacetylation[3, 4, 5]
124PYCDGTHKSEQVQKAacetylation[1, 2, 3, 4, 5, 6, 7]
124PYCDGTHKSEQVQKAsuccinylation[1]
130HKSEQVQKAEVGSPLacetylation[2, 4]
Reference
 [1] SIRT5-Mediated Lysine Desuccinylation Impacts Diverse Metabolic Pathways.
 Park J, Chen Y, Tishkoff DX, Peng C, Tan M, Dai L, Xie Z, Zhang Y, Zwaans BM, Skinner ME, Lombard DB, Zhao Y.
 Mol Cell. 2013 Jun 27;50(6):919-30. [PMID: 23806337]
 [2] Proteomic analysis of lysine acetylation sites in rat tissues reveals organ specificity and subcellular patterns.
 Lundby A, Lage K, Weinert BT, Bekker-Jensen DB, Secher A, Skovgaard T, Kelstrup CD, Dmytriyev A, Choudhary C, Lundby C, Olsen JV.
 Cell Rep. 2012 Aug 30;2(2):419-31. [PMID: 22902405]
 [3] Calorie restriction and SIRT3 trigger global reprogramming of the mitochondrial protein acetylome.
 Hebert AS, Dittenhafer-Reed KE, Yu W, Bailey DJ, Selen ES, Boersma MD, Carson JJ, Tonelli M, Balloon AJ, Higbee AJ, Westphall MS, Pagliarini DJ, Prolla TA, Assadi-Porter F, Roy S, Denu JM, Coon JJ.
 Mol Cell. 2013 Jan 10;49(1):186-99. [PMID: 23201123]
 [4] Label-free quantitative proteomics of the lysine acetylome in mitochondria identifies substrates of SIRT3 in metabolic pathways.
 Rardin MJ, Newman JC, Held JM, Cusack MP, Sorensen DJ, Li B, Schilling B, Mooney SD, Kahn CR, Verdin E, Gibson BW.
 Proc Natl Acad Sci U S A. 2013 Apr 16;110(16):6601-6. [PMID: 23576753]
 [5] Quantification of mitochondrial acetylation dynamics highlights prominent sites of metabolic regulation.
 Still AJ, Floyd BJ, Hebert AS, Bingman CA, Carson JJ, Gunderson DR, Dolan BK, Grimsrud PA, Dittenhafer-Reed KE, Stapleton DS, Keller MP, Westphall MS, Denu JM, Attie AD, Coon JJ, Pagliarini DJ.
 J Biol Chem. 2013 Jul 17;. [PMID: 23864654]
 [6] Quantitative assessment of the impact of the gut microbiota on lysine epsilon-acetylation of host proteins using gnotobiotic mice.
 Simon GM, Cheng J, Gordon JI.
 Proc Natl Acad Sci U S A. 2012 Jul 10;109(28):11133-8. [PMID: 22733758]
 [7] Circadian acetylome reveals regulation of mitochondrial metabolic pathways.
 Masri S, Patel VR, Eckel-Mahan KL, Peleg S, Forne I, Ladurner AG, Baldi P, Imhof A, Sassone-Corsi P.
 Proc Natl Acad Sci U S A. 2013 Feb 26;110(9):3339-44. [PMID: 23341599
Functional Description
  
Sequence Annotation
 METAL 70 70 Iron-sulfur 1 (2Fe-2S) (By similarity).
 METAL 72 72 Iron-sulfur 1 (2Fe-2S) (By similarity).
 METAL 81 81 Iron-sulfur 1 (2Fe-2S) (By similarity).
 METAL 85 85 Iron-sulfur 1 (2Fe-2S); via pros nitrogen
 METAL 108 108 Iron-sulfur 2 (2Fe-2S) (By similarity).
 METAL 110 110 Iron-sulfur 2 (2Fe-2S) (By similarity).
 METAL 119 119 Iron-sulfur 2 (2Fe-2S) (By similarity).
 METAL 123 123 Iron-sulfur 2 (2Fe-2S); via pros nitrogen
 MOD_RES 65 65 N6-acetyllysine (By similarity).  
Keyword
 2Fe-2S; Acetylation; Complete proteome; Iron; Iron-sulfur; Metal-binding; Mitochondrion; Reference proteome; Transit peptide. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 137 AA 
Protein Sequence
MGFRRLSFPT DFIFLFPNHI CLPALSKPYQ RREISSWLAR WFPKDPAKPV VAQKTPIRLE 60
LVAGKTYRWC VCGRSKNQPF CDGSHFFQRT GLSPLKFKAQ ETRTVALCTC KATQRPPYCD 120
GTHKSEQVQK AEVGSPL 137 
Gene Ontology
 GO:0005739; C:mitochondrion; IDA:MGI.
 GO:0051537; F:2 iron, 2 sulfur cluster binding; IEA:UniProtKB-KW.
 GO:0046872; F:metal ion binding; IEA:UniProtKB-KW. 
Interpro
 IPR018967; FeS-contain_CDGSH-typ.
 IPR006622; FeS-contain_CDGSH-typ_subfam. 
Pfam
 PF09360; zf-CDGSH 
SMART
 SM00704; ZnF_CDGSH 
PROSITE
  
PRINTS