CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-039370
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
  
Protein Name
 DNA polymerase 
Protein Synonyms/Alias
  
Gene Name
 Rev3l 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Rattus norvegicus (Rat) 
NCBI Taxa ID
 10116 
Lysine Modification
Position
Peptide
Type
References
2935PALELTRKMLAYDRRacetylation[1]
Reference
 [1] Proteomic analysis of lysine acetylation sites in rat tissues reveals organ specificity and subcellular patterns.
 Lundby A, Lage K, Weinert BT, Bekker-Jensen DB, Secher A, Skovgaard T, Kelstrup CD, Dmytriyev A, Choudhary C, Lundby C, Olsen JV.
 Cell Rep. 2012 Aug 30;2(2):419-31. [PMID: 22902405
Functional Description
  
Sequence Annotation
  
Keyword
 Complete proteome; DNA replication; DNA-binding; DNA-directed DNA polymerase; Nucleotidyltransferase; Reference proteome; Transferase. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 3132 AA 
Protein Sequence
MFSVRIVTAD YYMASPLPGL DICQSPLTQH PVKKVPVVRV FGATPAGQKT CLHLHGVFPY 60
LYVPYDGYGQ QPERYLSQMA LSIDRALNVA LGNPSSTAQH VFKVSLVSGM PFYGYHEKER 120
HFMKIYLYNP AMVKRICELL QSGAIMNKFY QPHEAHIPYL LQLFIDYNLY GMNLINLAAV 180
KFRKARRKGD ASHATGLFKP QLSGNSPAGT LFRWEEDEIP SSLLLEGVEP LSTCELEVDA 240
VAADILNRLD IEAQIGGNPG LQAIWEDEKQ RRRNRNENSQ ISQPESQDCR LVPATESEKI 300
FQKRLQEILK QNDFSVTLSG SVDYSSGSQE FSAELTLHSE ILSPEMLPCS PANMIEVHRD 360
NDWSKGNTKH KVEEALINEE AILNLIENSQ TFQPLTQRLS ETPVFMDSSP DESLVHLLAG 420
LESDGYQGEK NRMPLPRHTF GESQNPQNSD DEENAPQMEK EEMELSVLMS QRWDSDTEEQ 480
CAKKRSLCRN AHRSSTEEDD SSSEEEMEWT DNSLLFANLS IPQLDGTADE NSDNPLNNEN 540
SRAHSSVIAT SKLSVRPSVF HKDAATLEPP SSAKITFQCK HTSALSSHGL NKDDLIEGLS 600
QPNNTEKGRD SSVTFTKEST YSMKYSGSLS STVHSDNSHK EICKKDKSLP VPSCESSVFD 660
YEEDIPSVTR QAPSRKYSNM RKIEKDAPFI HANRHTSEST LGKNSFNFAD LNHSKNKLSS 720
EGNERGNSTA LNSVFPSSLA ESCDLLSSSG ENRSVAHSLD SITDESGRSK LKIRYEEFQE 780
HKMERPSLSQ QAAHYMFFPS VVLSNCLTRP QKLSPVTYKL QPGSKTSRLK LNKKKLISLQ 840
ETSTKSSETG AAKDSCTHNH PYSGTPEKES GLSSDLIKAT HGTFENKTPT EHFIDCHFGD 900
GSLETEQSFG LYGNKYTLRA KRKVNYETED SESSFVTHNS KISLPHPMEI GENLDGTLKS 960
RKRRKMSKKL PPVIIKYIII NRFRGRKNML VKLGKIDSKE KQVILTEEKM ELYKKLAPLK 1020
DFWPKVPDSP ATKYPIYPLT PKKSHRRKSK HKSAKRKPGK QHRASSENIK RTLSFRKKRT 1080
HAVLSPPSPS YIAETEDCDL NYSDVMSKLG FLSERSTSPV NSSPPRCWSP TDPRAEEIMA 1140
AAEKESVLFK GPNVCNTKTV SPRVGKASRA RAQVKKSKAR LAKSSVVTNK RNKRNQTNQL 1200
VDNGKKKPRA KQKQRANEKG ISRKPVIPTD ETTKPPSEAE LTPSQRSVPE LTSSSGIHTL 1260
SKQKEMTQTG PAMDHPLPPC QPTGINAQQR LSNCFSSFLE SRKSVQFPTF PSSRGDSRSS 1320
VYSSIGPGVS KVNTQRSHSQ SAMFTRKETT LIQKSIFDLS NHLSQVAQST QLCSGIISPK 1380
TEESSNTQKN CGSSIGKLNE YRSSLESKPE KVCAPNFLHC RDSQQQTVNV SEQSKPSETC 1440
SPGNAASEES QTPNCFVTSL RSPIKQITWE QRQRGCILEM SSFKPEKVKQ RSLSEAISQT 1500
KALSQCKNQN VSTPSVFGEG QSGLAVLKEL LQKRQQKAQT TNVQDSASSH QPDKDISVSA 1560
EHKKTNKRTR AVASPRKPRA PRRTKPKEQT PRRLKVDPLN LQTSGHLDNS LSDDSPILFS 1620
DPGFESCYSL EDSLSPEHNY NFDINTIGQT GFCSLYSGSQ FVPADQNLPQ KFLSDAVQDL 1680
FPGQAIEKNE LLSHDRQSCT EEKHHVSDSG PWVRASTLNP ELFEKVGIDN NENHRHSQWK 1740
TSFHPLTSHS NSIMESFCVQ QAESCLPEKS RLNRSSVSKE VFLSLPQASS SDWIQGHNGK 1800
EIEQSLDSAN TSFTTVLSSP DGELVDAASE DLELYVSRNN DVLTPTPDSS PRSTSSPLQS 1860
KNGSFTPRTA HILKPLMSPP SREEIVATLL DHDLSEAIYQ EPFCSNPSDV PEKPREIGGR 1920
LLMVETRLPN DLIEFEGDFS LEGLRLWKTA FSAMTQNPRP GSPLRNGPAV VNKESSNSHK 1980
TVEDKKIVIM PCRYAPSRQL VQAWLQAKEE YVRSKRLPRT ESTPVIKSAD NVSPSLNPGD 2040
TRAVAPQMDT CPHTLSSTAH AKEEVCQSQI ALQTSRTGCG QTVSASQTLL PAASAAVPEE 2100
EEEEEEEEEE EEEDENGYVS YSSPDSPGIP PWQQAASPDF RALNGEHRCS SPVEELCSRA 2160
VENFLKPIKD GIQKASCCES QVISPIHART RTEKCEPLCL HSTPVMPRKF LEKLPEATGL 2220
SPLSVEPKTQ KLYNKKGSDT DHLRRVLLTT QVENQFAAVN TPKKETSQID GPSLNNTYGF 2280
KVSIQNLQEA KALHEIQNLT LISVELHART RRDLQPDPEF DPICALFYCI SSDTPLPDTE 2340
KTELTGVIVI DKDKTVTHQD IRCQTPLLIR SGVTGLEVTY AADEKALFQE VTNIMKRYDP 2400
DILLGYEIQM HSWGYLLQRA AALSVDLCQM ISRVPDDKIE NRFAAERDDY GSDTMSEINI 2460
VGRITLNLWR IMRNEVALTN YTFENVSFHV LHQRFPLFTF RVLSDWFDNK TDLYRWKMVD 2520
HYVSRVRGNL QMLEQLDLIG KTSEMARLFG IQFLHVLTRG SQYRVESMML RIAKPMNYIP 2580
VTPSVQQRSQ MRAPQCVPLI MEPESRFYSN SVLVLDFQSL YPSIVIAYNY CFSTCLGHIE 2640
NLGKYDEFKF GCTSLRVPPD LLYQIRHDIT VSPNGVAFVK PSVRKGVLPR MLEEILKTRF 2700
MVKQSMKAYR QDRALSRMLN ARQLGLKLIA NVTFGYTSAN FSGRMPCIEV GDSIVHKARE 2760
TLERAIKLVN DTKKWGARVV YGDTDSMFVL LKGATKEQSF KIGQEIAEAV TATNPKPVKL 2820
KFEKVYLPCV LQTKKRYVGY MYETLDQKDP VFDAKGIETV RRDSCPAVSK ILERSLKLLF 2880
ETRDISLIKQ YVQRQCMKLV EGKASIQDFI FAKEYRGSFS YRPGACVPAL ELTRKMLAYD 2940
RRSEPRVGER VPYVIVYGTP GLPLIQLIRR PAEVLQDPTL RLNATYYITK QILPPLARIF 3000
SLIGIDVFSW YQELPRIQKA TSSSRSDLEG RKGTISQYFT TLHCPVCDGL TQHGICSQCR 3060
SQPQHVAIIL NQEIRELERQ QEQLVKICRN CTGSFDRHIP CVSLNCPVLF KLSRVNRELS 3120
KAPYLRQLLD QF 3132 
Gene Ontology
 GO:0005694; C:chromosome; IBA:RefGenome.
 GO:0005634; C:nucleus; IBA:RefGenome.
 GO:0016035; C:zeta DNA polymerase complex; IBA:RefGenome.
 GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
 GO:0003887; F:DNA-directed DNA polymerase activity; IBA:RefGenome.
 GO:0000166; F:nucleotide binding; IEA:InterPro.
 GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
 GO:0019985; P:translesion synthesis; IBA:RefGenome. 
Interpro
 IPR006172; DNA-dir_DNA_pol_B.
 IPR017964; DNA-dir_DNA_pol_B_CS.
 IPR006133; DNA-dir_DNA_pol_B_exonuc.
 IPR006134; DNA-dir_DNA_pol_B_multi_dom.
 IPR023211; DNA_pol_palm_dom.
 IPR012337; RNaseH-like_dom.
 IPR025687; Znf-C4pol. 
Pfam
 PF00136; DNA_pol_B
 PF03104; DNA_pol_B_exo1
 PF14260; zf-C4pol 
SMART
 SM00486; POLBc 
PROSITE
 PS00116; DNA_POLYMERASE_B 
PRINTS
 PR00106; DNAPOLB.