CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-005318
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Low molecular weight phosphotyrosine protein phosphatase 
Protein Synonyms/Alias
 LMW-PTP; LMW-PTPase; Adipocyte acid phosphatase; Low molecular weight cytosolic acid phosphatase; Red cell acid phosphatase 1 
Gene Name
 ACP1 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
7*MAEQATKSVLFVCLubiquitination[1]
29IAEAVFRKLVTDQNIubiquitination[2]
113QVKTCKAKIELLGSYubiquitination[2, 3, 4, 5]
156CCRAFLEKAH*****acetylation[6]
156CCRAFLEKAH*****ubiquitination[2]
Reference
 [1] Methods for quantification of in vivo changes in protein ubiquitination following proteasome and deubiquitinase inhibition.
 Udeshi ND, Mani DR, Eisenhaure T, Mertins P, Jaffe JD, Clauser KR, Hacohen N, Carr SA.
 Mol Cell Proteomics. 2012 May;11(5):148-59. [PMID: 22505724]
 [2] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961]
 [3] A proteome-wide, quantitative survey of in vivo ubiquitylation sites reveals widespread regulatory roles.
 Wagner SA, Beli P, Weinert BT, Nielsen ML, Cox J, Mann M, Choudhary C.
 Mol Cell Proteomics. 2011 Oct;10(10):M111.013284. [PMID: 21890473]
 [4] hCKSAAP_UbSite: improved prediction of human ubiquitination sites by exploiting amino acid pattern and properties.
 Chen Z, Zhou Y, Song J, Zhang Z.
 Biochim Biophys Acta. 2013 Aug;1834(8):1461-7. [PMID: 23603789]
 [5] Integrated proteomic analysis of post-translational modifications by serial enrichment.
 Mertins P, Qiao JW, Patel J, Udeshi ND, Clauser KR, Mani DR, Burgess MW, Gillette MA, Jaffe JD, Carr SA.
 Nat Methods. 2013 Jul;10(7):634-7. [PMID: 23749302]
 [6] Lysine acetylation targets protein complexes and co-regulates major cellular functions.
 Choudhary C, Kumar C, Gnad F, Nielsen ML, Rehman M, Walther TC, Olsen JV, Mann M.
 Science. 2009 Aug 14;325(5942):834-40. [PMID: 19608861
Functional Description
 Acts on tyrosine phosphorylated proteins, low-MW aryl phosphates and natural and synthetic acyl phosphates. Isoform 3 does not possess phosphatase activity. 
Sequence Annotation
 ACT_SITE 13 13 Nucleophile (By similarity).
 ACT_SITE 19 19 By similarity.
 ACT_SITE 130 130 Proton donor (By similarity).
 MOD_RES 2 2 N-acetylalanine.
 MOD_RES 132 132 Phosphotyrosine.
 MOD_RES 133 133 Phosphotyrosine.  
Keyword
 3D-structure; Acetylation; Alternative splicing; Complete proteome; Cytoplasm; Direct protein sequencing; Hydrolase; Phosphoprotein; Polymorphism; Protein phosphatase; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 158 AA 
Protein Sequence
MAEQATKSVL FVCLGNICRS PIAEAVFRKL VTDQNISENW RVDSAATSGY EIGNPPDYRG 60
QSCMKRHGIP MSHVARQITK EDFATFDYIL CMDESNLRDL NRKSNQVKTC KAKIELLGSY 120
DPQKQLIIED PYYGNDSDFE TVYQQCVRCC RAFLEKAH 158 
Gene Ontology
 GO:0005737; C:cytoplasm; IDA:UniProtKB.
 GO:0009898; C:internal side of plasma membrane; IDA:UniProtKB.
 GO:0043005; C:neuron projection; IEA:Compara.
 GO:0005634; C:nucleus; IDA:HPA.
 GO:0003993; F:acid phosphatase activity; TAS:ProtInc.
 GO:0004726; F:non-membrane spanning protein tyrosine phosphatase activity; IEA:InterPro.
 GO:0007268; P:synaptic transmission; IEA:Compara. 
Interpro
 IPR023485; Ptyr_pPase_SF.
 IPR002115; Tyr_Pase_low_mol_wt_mml.
 IPR000106; Tyr_phospatase/Ars_reductase.
 IPR017867; Tyr_phospatase_low_mol_wt. 
Pfam
 PF01451; LMWPc 
SMART
 SM00226; LMWPc 
PROSITE
  
PRINTS
 PR00719; LMWPTPASE.
 PR00720; MAMMALPTPASE.