CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-004365
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Uridylate kinase 
Protein Synonyms/Alias
 UK; ATP:UMP phosphotransferase; Deoxycytidylate kinase; CK; dCMP kinase; Suppressor of cdc8 protein; Uridine monophosphate kinase; UMP kinase; UMPK 
Gene Name
 URA6 
Gene Synonyms/Alias
 SOC8; YKL024C 
Created Date
 July 27, 2013 
Organism
 Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) 
NCBI Taxa ID
 559292 
Lysine Modification
Position
Peptide
Type
References
67SQYGELIKNCIKEGQacetylation[1]
67SQYGELIKNCIKEGQubiquitination[2]
99NVKANKHKFLIDGFPacetylation[1]
Reference
 [1] Proteome-wide analysis of lysine acetylation suggests its broad regulatory scope in Saccharomyces cerevisiae.
 Henriksen P, Wagner SA, Weinert BT, Sharma S, Bacinskaja G, Rehman M, Juffer AH, Walther TC, Lisby M, Choudhary C.
 Mol Cell Proteomics. 2012 Nov;11(11):1510-22. [PMID: 22865919]
 [2] Global analysis of phosphorylation and ubiquitylation cross-talk in protein degradation.
 Swaney DL, Beltrao P, Starita L, Guo A, Rush J, Fields S, Krogan NJ, VillĂ©n J.
 Nat Methods. 2013 Jul;10(7):676-82. [PMID: 23749301
Functional Description
 Catalyzes the phosphorylation of pyrimidine nucleoside monophosphates at the expense of ATP. Plays an important role in de novo pyrimidine nucleotide biosynthesis. Has preference for UMP and dUMP as phosphate acceptors, but can also use CMP, dCMP, AMP, GMP, dGMP and dTMP. ATP and dATP are the best phosphate donors, but can also use GTP, dGTP, dCTP, and dTTP to some degree. 
Sequence Annotation
 NP_BIND 26 31 ATP.
 NP_BIND 74 76 NMP.
 NP_BIND 104 107 NMP.
 REGION 46 76 NMPbind.
 REGION 141 151 LID.
 BINDING 52 52 NMP.
 BINDING 111 111 NMP.
 BINDING 142 142 ATP.
 BINDING 148 148 NMP.
 BINDING 159 159 NMP.
 BINDING 187 187 ATP; via carbonyl oxygen.  
Keyword
 3D-structure; ATP-binding; Complete proteome; Cytoplasm; Kinase; Nucleotide-binding; Nucleus; Pyrimidine biosynthesis; Reference proteome; Transferase. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 204 AA 
Protein Sequence
MTAATTSQPA FSPDQVSVIF VLGGPGAGKG TQCEKLVKDY SFVHLSAGDL LRAEQGRAGS 60
QYGELIKNCI KEGQIVPQEI TLALLRNAIS DNVKANKHKF LIDGFPRKMD QAISFERDIV 120
ESKFILFFDC PEDIMLERLL ERGKTSGRSD DNIESIKKRF NTFKETSMPV IEYFETKSKV 180
VRVRCDRSVE DVYKDVQDAI RDSL 204 
Gene Ontology
 GO:0005737; C:cytoplasm; IDA:SGD.
 GO:0005634; C:nucleus; IDA:SGD.
 GO:0004017; F:adenylate kinase activity; IDA:SGD.
 GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
 GO:0004127; F:cytidylate kinase activity; IEA:EC.
 GO:0009041; F:uridylate kinase activity; IDA:SGD.
 GO:0006207; P:'de novo' pyrimidine nucleobase biosynthetic process; IDA:SGD.
 GO:0006221; P:pyrimidine nucleotide biosynthetic process; IEA:UniProtKB-KW. 
Interpro
 IPR000850; Adenylate_kin.
 IPR027417; P-loop_NTPase.
 IPR006266; UMP_CMP_kinase. 
Pfam
 PF00406; ADK 
SMART
  
PROSITE
 PS00113; ADENYLATE_KINASE 
PRINTS
 PR00094; ADENYLTKNASE.