CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-003233
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 
Protein Synonyms/Alias
 Polyprenyl p-hydroxybenzoate decarboxylase 
Gene Name
 ubiD 
Gene Synonyms/Alias
 yigC; yigY; b3843; JW3819 
Created Date
 July 27, 2013 
Organism
 Escherichia coli (strain K12) 
NCBI Taxa ID
 83333 
Lysine Modification
Position
Peptide
Type
References
90SALREVGKLLAFLKEacetylation[1]
96GKLLAFLKEPEPPKGacetylation[1]
110GFRDLFDKLPQFKQVacetylation[1]
115FDKLPQFKQVLNMPTacetylation[1]
123QVLNMPTKRLRGAPCacetylation[1]
Reference
 [1] Acetyl-Phosphate Is a Critical Determinant of Lysine Acetylation in E. coli.
 Weinert BT, Iesmantavicius V, Wagner SA, Schölz C, Gummesson B, Beli P, Nyström T, Choudhary C.
 Mol Cell. 2013 Jul 25;51(2):265-72. [PMID: 23830618] 
Functional Description
 Catalyzes the decarboxylation of 3-octaprenyl-4-hydroxy benzoate to 2-octaprenylphenol. 
Sequence Annotation
  
Keyword
 3D-structure; Cell membrane; Complete proteome; Decarboxylase; Lyase; Manganese; Membrane; Reference proteome; Ubiquinone biosynthesis. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 497 AA 
Protein Sequence
MDAMKYNDLR DFLTLLEQQG ELKRITLPVD PHLEITEIAD RTLRAGGPAL LFENPKGYSM 60
PVLCNLFGTP KRVAMGMGQE DVSALREVGK LLAFLKEPEP PKGFRDLFDK LPQFKQVLNM 120
PTKRLRGAPC QQKIVSGDDV DLNRIPIMTC WPEDAAPLIT WGLTVTRGPH KERQNLGIYR 180
QQLIGKNKLI MRWLSHRGGA LDYQEWCAAH PGERFPVSVA LGADPATILG AVTPVPDTLS 240
EYAFAGLLRG TKTEVVKCIS NDLEVPASAE IVLEGYIEQG ETAPEGPYGD HTGYYNEVDS 300
FPVFTVTHIT QREDAIYHST YTGRPPDEPA VLGVALNEVF VPILQKQFPE IVDFYLPPEG 360
CSYRLAVVTI KKQYAGHAKR VMMGVWSFLR QFMYTKFVIV CDDDVNARDW NDVIWAITTR 420
MDPARDTVLV ENTPIDYLDF ASPVSGLGSK MGLDATNKWP GETQREWGRP IKKDPDVVAH 480
IDAIWDELAI FNNGKSA 497 
Gene Ontology
 GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
 GO:0008694; F:3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity; IDA:EcoCyc.
 GO:0010181; F:FMN binding; IEA:InterPro.
 GO:0016491; F:oxidoreductase activity; IEA:InterPro.
 GO:0006744; P:ubiquinone biosynthetic process; IMP:EcoCyc. 
Interpro
 IPR023677; OPHB_Carboxy-lyase.
 IPR012349; Split_barrel_FMN-bd.
 IPR002830; UbiD. 
Pfam
 PF01977; UbiD 
SMART
  
PROSITE
  
PRINTS