CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-037720
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
  
Protein Name
 Poly(U)-binding-splicing factor PUF60 
Protein Synonyms/Alias
  
Gene Name
 PUF60 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
117YAMEQSIKSVLVKQTubiquitination[1, 2]
Reference
 [1] Systematic and quantitative assessment of the ubiquitin-modified proteome.
 Kim W, Bennett EJ, Huttlin EL, Guo A, Li J, Possemato A, Sowa ME, Rad R, Rush J, Comb MJ, Harper JW, Gygi SP.
 Mol Cell. 2011 Oct 21;44(2):325-40. [PMID: 21906983]
 [2] Methods for quantification of in vivo changes in protein ubiquitination following proteasome and deubiquitinase inhibition.
 Udeshi ND, Mani DR, Eisenhaure T, Mertins P, Jaffe JD, Clauser KR, Hacohen N, Carr SA.
 Mol Cell Proteomics. 2012 May;11(5):148-59. [PMID: 22505724
Functional Description
  
Sequence Annotation
  
Keyword
 Complete proteome; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 228 AA 
Protein Sequence
MEQLNLADSG LVGKEARRCR RASPPMGMPS AWWLQNEAGC LFAARQVNGQ QGGGSEPAAA 60
AAVVAAGDKW KPPQGTDSIK MENGQSTAAK LGLPPLTPEQ QEALQKAKKY AMEQSIKSVL 120
VKQTIAHQQQ QLTNLQMAAV TMGFGDPLSP LQSMAAQRQR ALAIMCRVYV GSIYYELGED 180
TIRQAFAPFG PIKSIDMSWD SVTMKHKGFA FVEYEVPEAA QLALEQMN 228 
Gene Ontology
 GO:0005634; C:nucleus; IDA:HPA.
 GO:0003676; F:nucleic acid binding; IEA:InterPro.
 GO:0000166; F:nucleotide binding; IEA:InterPro. 
Interpro
 IPR012677; Nucleotide-bd_a/b_plait.
 IPR000504; RRM_dom. 
Pfam
 PF00076; RRM_1 
SMART
 SM00360; RRM 
PROSITE
 PS50102; RRM 
PRINTS