CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-018497
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Histone-lysine N-methyltransferase setd3 
Protein Synonyms/Alias
 Endothelial differentiation inhibitory protein D10; SET domain-containing protein 3 
Gene Name
 Setd3 
Gene Synonyms/Alias
 D12Ertd771e 
Created Date
 July 27, 2013 
Organism
 Mus musculus (Mouse) 
NCBI Taxa ID
 10090 
Lysine Modification
Position
Peptide
Type
References
115LRATRDIKAEELFLWubiquitination[1]
211HDVFSQYKNTARQYAubiquitination[1]
439DRASLLLKTYKTTIEubiquitination[1]
453EEDKIVLKNPDLSVRubiquitination[1]
Reference
 [1] Proteomic analyses reveal divergent ubiquitylation site patterns in murine tissues.
 Wagner SA, Beli P, Weinert BT, Schölz C, Kelstrup CD, Young C, Nielsen ML, Olsen JV, Brakebusch C, Choudhary C.
 Mol Cell Proteomics. 2012 Dec;11(12):1578-85. [PMID: 22790023
Functional Description
 Histone methyltransferase that methylates 'Lys-36' of histone H3 (H3K36me). H3 'Lys-36' methylation represents a specific tag for epigenetic transcriptional activation (By similarity). 
Sequence Annotation
 DOMAIN 94 314 SET.
 MOD_RES 14 14 Phosphothreonine.  
Keyword
 Activator; Alternative splicing; Chromatin regulator; Complete proteome; Methyltransferase; Nucleus; Phosphoprotein; Reference proteome; S-adenosyl-L-methionine; Transcription; Transcription regulation; Transferase. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 594 AA 
Protein Sequence
MGKKSRVKTQ KSGTGATATV SPKEILNLTS ELLQKCSSPA PSPGKEWEEY TQIRALVEKI 60
RKKQKGLSVT FDGKREDYFP DLMKWASENG ASVEGFEMVN FKEEGFGLRA TRDIKAEELF 120
LWVPRKLLMT VESAKNSVLG PLYSQDRILQ AMGNIALAFH LLCERASPNS FWQPYIQTLP 180
SEYDTPLYFE EEEVRCLQST QAIHDVFSQY KNTARQYAYF YKVIQTHPHA NKLPLKESFT 240
YEDYRWAVSS VMTRQNQIPT EDGSRVTLAL IPLWDMCNHT NGLITTGYNL EDDRCECVAL 300
QDFQAGDQIY IFYGTRSNAE FVIHSGFFFD NNSHDRVKIK LGVSKSDRLY AMKAEVLARA 360
GIPTSSVFAL HSTEPPISAQ LLAFLRVFCM TEEELKEHLL GDSAIDRIFT LGNAEFPVSW 420
DNEVKLWTFL EDRASLLLKT YKTTIEEDKI VLKNPDLSVR ATMAIKLRLG EKEILEKAVK 480
SAAVNREYYR KHMEERAPLP RYEESDLGLL EGGVGDSRLP LVLRKLEEEA GVQESLSLTE 540
TVSKVKAAEN GLVNGENLIP NGTRSENESL SPEESENVTG EESSGSMAKV KERL 594 
Gene Ontology
 GO:0000790; C:nuclear chromatin; IDA:MGI.
 GO:0046975; F:histone methyltransferase activity (H3-K36 specific); ISS:UniProtKB.
 GO:0042800; F:histone methyltransferase activity (H3-K4 specific); IDA:MGI.
 GO:0003713; F:transcription coactivator activity; ISS:UniProtKB.
 GO:0018027; P:peptidyl-lysine dimethylation; ISS:UniProtKB.
 GO:0018026; P:peptidyl-lysine monomethylation; ISS:UniProtKB.
 GO:0018023; P:peptidyl-lysine trimethylation; ISS:UniProtKB.
 GO:0051149; P:positive regulation of muscle cell differentiation; IMP:MGI.
 GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IDA:MGI.
 GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. 
Interpro
 IPR025785; Hist-Lys_N-MeTrfase_SETD3.
 IPR015353; Rubisco_LSMT_subst-bd.
 IPR001214; SET_dom. 
Pfam
 PF09273; Rubis-subs-bind
 PF00856; SET 
SMART
  
PROSITE
 PS51565; SAM_MT43_SETD3
 PS50280; SET 
PRINTS