CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-007274
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Transketolase 
Protein Synonyms/Alias
 TK; P68 
Gene Name
 Tkt 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Mus musculus (Mouse) 
NCBI Taxa ID
 10090 
Lysine Modification
Position
Peptide
Type
References
6**MEGYHKPDQQKLQacetylation[1]
6**MEGYHKPDQQKLQubiquitination[2]
11YHKPDQQKLQALKDTacetylation[1]
16QQKLQALKDTANRLRubiquitination[2]
102AELLNLRKISSDLDGubiquitination[2]
114LDGHPVPKQAFTDVAubiquitination[2]
144YTGKYFDKASYRVYCacetylation[3]
144YTGKYFDKASYRVYCubiquitination[2]
204HQVDIYQKRCEAFGWacetylation[3, 4]
232CKAFGQAKHQPTAIIacetylation[1, 3, 5]
232CKAFGQAKHQPTAIIubiquitination[2]
241QPTAIIAKTFKGRGIacetylation[3]
241QPTAIIAKTFKGRGIubiquitination[2]
254GITGIEDKEAWHGKPacetylation[4]
254GITGIEDKEAWHGKPubiquitination[2]
260DKEAWHGKPLPKNMAacetylation[1]
260DKEAWHGKPLPKNMAubiquitination[2]
264WHGKPLPKNMAEQIIubiquitination[2]
281IYSQVQSKKKILATPubiquitination[2]
282YSQVQSKKKILATPPubiquitination[2]
283SQVQSKKKILATPPQubiquitination[2]
310MPTPPSYKVGDKIATacetylation[3]
310MPTPPSYKVGDKIATubiquitination[2]
314PSYKVGDKIATRKAYacetylation[1, 5, 6]
314PSYKVGDKIATRKAYsuccinylation[5]
319GDKIATRKAYGLALAacetylation[3]
319GDKIATRKAYGLALAubiquitination[2]
327AYGLALAKLGHASDRacetylation[3]
327AYGLALAKLGHASDRubiquitination[2]
343IALDGDTKNSTFSELacetylation[3]
343IALDGDTKNSTFSELubiquitination[2]
456SDGVATEKAVELAANubiquitination[2]
493DFQVGQAKVVLKSKDubiquitination[2]
499AKVVLKSKDDQVTVIacetylation[1]
499AKVVLKSKDDQVTVIubiquitination[2]
538VLDPFTIKPLDRKLIacetylation[3, 5]
538VLDPFTIKPLDRKLIubiquitination[2]
543TIKPLDRKLILDSARacetylation[3]
543TIKPLDRKLILDSARubiquitination[2]
597SQVPRSGKPAELLKMubiquitination[2]
603GKPAELLKMFGIDKDacetylation[4]
609LKMFGIDKDAIVQAVacetylation[3, 5]
Reference
 [1] Calorie restriction and SIRT3 trigger global reprogramming of the mitochondrial protein acetylome.
 Hebert AS, Dittenhafer-Reed KE, Yu W, Bailey DJ, Selen ES, Boersma MD, Carson JJ, Tonelli M, Balloon AJ, Higbee AJ, Westphall MS, Pagliarini DJ, Prolla TA, Assadi-Porter F, Roy S, Denu JM, Coon JJ.
 Mol Cell. 2013 Jan 10;49(1):186-99. [PMID: 23201123]
 [2] Proteomic analyses reveal divergent ubiquitylation site patterns in murine tissues.
 Wagner SA, Beli P, Weinert BT, Schölz C, Kelstrup CD, Young C, Nielsen ML, Olsen JV, Brakebusch C, Choudhary C.
 Mol Cell Proteomics. 2012 Dec;11(12):1578-85. [PMID: 22790023]
 [3] Quantitative acetylome analysis reveals the roles of SIRT1 in regulating diverse substrates and cellular pathways.
 Chen Y, Zhao W, Yang JS, Cheng Z, Luo H, Lu Z, Tan M, Gu W, Zhao Y.
 Mol Cell Proteomics. 2012 Oct;11(10):1048-62. [PMID: 22826441]
 [4] Proteomic investigations of lysine acetylation identify diverse substrates of mitochondrial deacetylase sirt3.
 Sol EM, Wagner SA, Weinert BT, Kumar A, Kim HS, Deng CX, Choudhary C.
 PLoS One. 2012;7(12):e50545. [PMID: 23236377]
 [5] SIRT5-Mediated Lysine Desuccinylation Impacts Diverse Metabolic Pathways.
 Park J, Chen Y, Tishkoff DX, Peng C, Tan M, Dai L, Xie Z, Zhang Y, Zwaans BM, Skinner ME, Lombard DB, Zhao Y.
 Mol Cell. 2013 Jun 27;50(6):919-30. [PMID: 23806337]
 [6] Quantification of mitochondrial acetylation dynamics highlights prominent sites of metabolic regulation.
 Still AJ, Floyd BJ, Hebert AS, Bingman CA, Carson JJ, Gunderson DR, Dolan BK, Grimsrud PA, Dittenhafer-Reed KE, Stapleton DS, Keller MP, Westphall MS, Denu JM, Attie AD, Coon JJ, Pagliarini DJ.
 J Biol Chem. 2013 Jul 17;. [PMID: 23864654
Functional Description
 Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate (By similarity). 
Sequence Annotation
 NP_BIND 123 125 Thiamine pyrophosphate (By similarity).
 ACT_SITE 366 366 Proton donor (By similarity).
 METAL 155 155 Magnesium (By similarity).
 METAL 185 185 Magnesium (By similarity).
 METAL 187 187 Magnesium; via carbonyl oxygen (By
 BINDING 37 37 Substrate (By similarity).
 BINDING 40 40 Thiamine pyrophosphate (By similarity).
 BINDING 77 77 Thiamine pyrophosphate (By similarity).
 BINDING 156 156 Thiamine pyrophosphate; via amide
 BINDING 185 185 Thiamine pyrophosphate (By similarity).
 BINDING 244 244 Thiamine pyrophosphate (By similarity).
 BINDING 258 258 Substrate (By similarity).
 BINDING 258 258 Thiamine pyrophosphate (By similarity).
 BINDING 318 318 Substrate (By similarity).
 BINDING 345 345 Substrate (By similarity).
 BINDING 392 392 Thiamine pyrophosphate (By similarity).
 BINDING 416 416 Substrate (By similarity).
 BINDING 424 424 Substrate (By similarity).
 BINDING 428 428 Thiamine pyrophosphate (By similarity).
 BINDING 474 474 Substrate (By similarity).
 MOD_RES 1 1 N-acetylmethionine (By similarity).
 MOD_RES 6 6 N6-acetyllysine (By similarity).
 MOD_RES 11 11 N6-acetyllysine (By similarity).
 MOD_RES 144 144 N6-acetyllysine (By similarity).
 MOD_RES 204 204 N6-acetyllysine (By similarity).
 MOD_RES 241 241 N6-acetyllysine (By similarity).
 MOD_RES 260 260 N6-acetyllysine (By similarity).
 MOD_RES 275 275 Phosphotyrosine.
 MOD_RES 287 287 Phosphothreonine (By similarity).
 MOD_RES 295 295 Phosphoserine (By similarity).
 MOD_RES 603 603 N6-acetyllysine (By similarity).  
Keyword
 Acetylation; Calcium; Complete proteome; Direct protein sequencing; Magnesium; Metal-binding; Phosphoprotein; Reference proteome; Thiamine pyrophosphate; Transferase. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 623 AA 
Protein Sequence
MEGYHKPDQQ KLQALKDTAN RLRISSIQAT TAAGSGHPTS CCSAAEIMAV LFFHTMRYKA 60
LDPRNPHNDR FVLSKGHAAP ILYAVWAEAG FLPEAELLNL RKISSDLDGH PVPKQAFTDV 120
ATGSLGQGLG AACGMAYTGK YFDKASYRVY CMLGDGEVSE GSVWEAMAFA GIYKLDNLVA 180
IFDINRLGQS DPAPLQHQVD IYQKRCEAFG WHTIIVDGHS VEELCKAFGQ AKHQPTAIIA 240
KTFKGRGITG IEDKEAWHGK PLPKNMAEQI IQEIYSQVQS KKKILATPPQ EDAPSVDIAN 300
IRMPTPPSYK VGDKIATRKA YGLALAKLGH ASDRIIALDG DTKNSTFSEL FKKEHPDRFI 360
ECYIAEQNMV SIAVGCATRD RTVPFCSTFA AFFTRAFDQI RMAAISESNI NLCGSHCGVS 420
IGEDGPSQMA LEDLAMFRSV PMSTVFYPSD GVATEKAVEL AANTKGICFI RTSRPENAII 480
YSNNEDFQVG QAKVVLKSKD DQVTVIGAGV TLHEALAAAE SLKKDKISIR VLDPFTIKPL 540
DRKLILDSAR ATKGRILTVE DHYYEGGIGE AVSAAVVGEP GVTVTRLAVS QVPRSGKPAE 600
LLKMFGIDKD AIVQAVKGLV TKG 623 
Gene Ontology
 GO:0005634; C:nucleus; IEA:Compara.
 GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
 GO:0004802; F:transketolase activity; IDA:MGI.
 GO:0040008; P:regulation of growth; IMP:MGI. 
Interpro
 IPR009014; Transketo_C/Pyr-ferredox_oxred.
 IPR015941; Transketolase-like_C.
 IPR005475; Transketolase-like_Pyr-bd.
 IPR020826; Transketolase_BS.
 IPR005476; Transketolase_C.
 IPR005474; Transketolase_N. 
Pfam
 PF02779; Transket_pyr
 PF02780; Transketolase_C
 PF00456; Transketolase_N 
SMART
 SM00861; Transket_pyr 
PROSITE
 PS00801; TRANSKETOLASE_1
 PS00802; TRANSKETOLASE_2 
PRINTS