CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-003488
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Bifunctional glutathionylspermidine synthetase/amidase 
Protein Synonyms/Alias
 GspSA; Glutathionylspermidine amidase; Gsp amidase; Glutathionylspermidine amidohydrolase [spermidine-forming]; Glutathionylspermidine synthetase; Gsp synthetase; Glutathione:spermidine ligase [ADP-forming]; Gsp synthase 
Gene Name
 gss 
Gene Synonyms/Alias
 gsp; b2988; JW2956 
Created Date
 July 27, 2013 
Organism
 Escherichia coli (strain K12) 
NCBI Taxa ID
 83333 
Lysine Modification
Position
Peptide
Type
References
122GALLIWDKGGEFKDTacetylation[1]
127WDKGGEFKDTGHVAIacetylation[1]
142ITQLHGNKVRIAEQNacetylation[1]
225NKGQFDGKWLDEKDPacetylation[1]
230DGKWLDEKDPLQNAYacetylation[1]
280MYLHATDKVLKDDNLacetylation[1]
283HATDKVLKDDNLLALacetylation[1]
388FVHIMQDKDIEENYHacetylation[1]
527TVNDELVKTGYAVKPacetylation[1]
555HHEEVLDKTSGKFAEacetylation[1]
575QQLWCLPKVDGKYIQacetylation[1]
606GDESLVIKKESDIEPacetylation[1]
607DESLVIKKESDIEPLacetylation[1]
618IEPLIVVKK******acetylation[1]
Reference
 [1] Acetyl-Phosphate Is a Critical Determinant of Lysine Acetylation in E. coli.
 Weinert BT, Iesmantavicius V, Wagner SA, Schölz C, Gummesson B, Beli P, Nyström T, Choudhary C.
 Mol Cell. 2013 Jul 25;51(2):265-72. [PMID: 23830618
Functional Description
 Catalyzes the formation of an amide bond between glutathione (GSH) and spermidine coupled with hydrolysis of ATP; also catalyzes the opposing reaction, i.e. the hydrolysis of glutathionylspermidine (Gsp) back to glutathione and spermidine. The amidase active site can also hydrolyze Gsp-disulfide (Gsp-S-S- Gsp) to Gsp-SG and Gsp S-thiolated proteins (GspSSPs) to GSH S- thiolated protein (GSSPs). Likely acts synergistically with glutaredoxin to regulate the redox environment of E.coli and defend against oxidative damage. In vitro, the amidase active site also catalyzes hydrolysis of amide and ester derivatives of glutathione (e.g. glutathione ethyl ester and glutathione amide) but lacks activity toward acetylspermidine (N1 and N8) and acetylspermine (N1). 
Sequence Annotation
 DOMAIN 34 176 Peptidase C51.
 NP_BIND 316 318 ATP.
 NP_BIND 539 540 ATP.
 NP_BIND 568 571 ATP.
 NP_BIND 603 605 ATP.
 REGION 2 195 Gsp amidase.
 REGION 78 81 Gsp binding.
 REGION 196 205 Linker.
 REGION 206 619 Gsp synthetase.
 ACT_SITE 59 59 Acyl-thioester intermediate; for amidase
 METAL 318 318 Magnesium 1.
 METAL 330 330 Magnesium 1.
 METAL 330 330 Magnesium 2.
 METAL 332 332 Magnesium 2.
 BINDING 58 58 Gsp.
 BINDING 64 64 Gsp.
 BINDING 149 149 Gsp.
 BINDING 316 316 Glutathione.
 BINDING 335 335 Glutathione.
 BINDING 391 391 Spermidine.
 BINDING 392 392 Glutathione.
 BINDING 446 446 Glutathione.
 BINDING 498 498 ATP.
 BINDING 533 533 ATP.
 BINDING 582 582 ATP.
 BINDING 610 610 Spermidine.
 MOD_RES 59 59 Cysteine sulfenic acid (-SOH); transient.  
Keyword
 3D-structure; ATP-binding; Complete proteome; Direct protein sequencing; Hydrolase; Ligase; Magnesium; Metal-binding; Multifunctional enzyme; Nucleotide-binding; Oxidation; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 619 AA 
Protein Sequence
MSKGTTSQDA PFGTLLGYAP GGVAIYSSDY SSLDPQEYED DAVFRSYIDD EYMGHKWQCV 60
EFARRFLFLN YGVVFTDVGM AWEIFSLRFL REVVNDNILP LQAFPNGSPR APVAGALLIW 120
DKGGEFKDTG HVAIITQLHG NKVRIAEQNV IHSPLPQGQQ WTRELEMVVE NGCYTLKDTF 180
DDTTILGWMI QTEDTEYSLP QPEIAGELLK ISGARLENKG QFDGKWLDEK DPLQNAYVQA 240
NGQVINQDPY HYYTITESAE QELIKATNEL HLMYLHATDK VLKDDNLLAL FDIPKILWPR 300
LRLSWQRRRH HMITGRMDFC MDERGLKVYE YNADSASCHT EAGLILERWA EQGYKGNGFN 360
PAEGLINELA GAWKHSRARP FVHIMQDKDI EENYHAQFME QALHQAGFET RILRGLDELG 420
WDAAGQLIDG EGRLVNCVWK TWAWETAFDQ IREVSDREFA AVPIRTGHPQ NEVRLIDVLL 480
RPEVLVFEPL WTVIPGNKAI LPILWSLFPH HRYLLDTDFT VNDELVKTGY AVKPIAGRCG 540
SNIDLVSHHE EVLDKTSGKF AEQKNIYQQL WCLPKVDGKY IQVCTFTVGG NYGGTCLRGD 600
ESLVIKKESD IEPLIVVKK 619 
Gene Ontology
 GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
 GO:0008884; F:glutathionylspermidine amidase activity; IDA:EcoCyc.
 GO:0008885; F:glutathionylspermidine synthase activity; IDA:EcoCyc.
 GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
 GO:0006749; P:glutathione metabolic process; IEA:UniProtKB-UniPathway.
 GO:0008216; P:spermidine metabolic process; IEA:UniProtKB-UniPathway. 
Interpro
 IPR007921; CHAP.
 IPR005494; GSPS_pre-ATP-grasp-like_dom.
 IPR016185; PreATP-grasp_dom. 
Pfam
 PF05257; CHAP
 PF03738; GSP_synth 
SMART
  
PROSITE
 PS50911; CHAP 
PRINTS