CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-005571
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Transketolase 1 
Protein Synonyms/Alias
 TK 1 
Gene Name
 tktA 
Gene Synonyms/Alias
 tkt; b2935; JW5478 
Created Date
 July 27, 2013 
Organism
 Escherichia coli (strain K12) 
NCBI Taxa ID
 83333 
Lysine Modification
Position
Peptide
Type
References
21LSMDAVQKAKSGHPGacetylation[1]
46VLWRDFLKHNPQNPSacetylation[1, 2]
225GHDAASIKRAVEEARacetylation[1]
237EARAVTDKPSLLMCKacetylation[1, 3]
244KPSLLMCKTIIGFGSacetylation[1]
254IGFGSPNKAGTHDSHacetylation[1]
297IYAQWDAKEAGQAKEacetylation[1]
303AKEAGQAKESAWNEKacetylation[3]
310KESAWNEKFAAYAKAacetylation[1]
316EKFAAYAKAYPQEAAacetylation[1, 3]
316EKFAAYAKAYPQEAApupylation[4]
330AEFTRRMKGEMPSDFacetylation[1]
340MPSDFDAKAKEFIAKacetylation[1]
342SDFDAKAKEFIAKLQacetylation[1]
347KAKEFIAKLQANPAKacetylation[1, 3, 5]
347KAKEFIAKLQANPAKpupylation[4]
354KLQANPAKIASRKASacetylation[1, 3]
452VRMAALMKQRQVMVYacetylation[3]
591PSTDAFDKQDAAYREacetylation[1]
603YRESVLPKAVTARVAacetylation[1, 3]
Reference
 [1] Acetyl-Phosphate Is a Critical Determinant of Lysine Acetylation in E. coli.
 Weinert BT, Iesmantavicius V, Wagner SA, Schölz C, Gummesson B, Beli P, Nyström T, Choudhary C.
 Mol Cell. 2013 Jul 25;51(2):265-72. [PMID: 23830618]
 [2] Lysine acetylation is a highly abundant and evolutionarily conserved modification in Escherichia coli.
 Zhang J, Sprung R, Pei J, Tan X, Kim S, Zhu H, Liu CF, Grishin NV, Zhao Y.
 Mol Cell Proteomics. 2009 Feb;8(2):215-25. [PMID: 18723842]
 [3] Comprehensive profiling of protein lysine acetylation in Escherichia coli.
 Zhang K, Zheng S, Yang JS, Chen Y, Cheng Z.
 J Proteome Res. 2013 Feb 1;12(2):844-51. [PMID: 23294111]
 [4] Reconstitution of the Mycobacterium tuberculosis pupylation pathway in Escherichia coli.
 Cerda-Maira FA, McAllister F, Bode NJ, Burns KE, Gygi SP, Darwin KH.
 EMBO Rep. 2011 Jul 8;12(8):863-70. [PMID: 21738222]
 [5] The diversity of lysine-acetylated proteins in Escherichia coli.
 Yu BJ, Kim JA, Moon JH, Ryu SE, Pan JG.
 J Microbiol Biotechnol. 2008 Sep;18(9):1529-36. [PMID: 18852508
Functional Description
 Catalyzes the reversible transfer of a two-carbon ketol group from sedoheptulose-7-phosphate to glyceraldehyde-3- phosphate, producing xylulose-5-phosphate and ribose-5-phosphate. Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate. 
Sequence Annotation
 NP_BIND 114 116 Thiamine pyrophosphate.
 ACT_SITE 411 411 Proton donor (Probable).
 METAL 155 155 Magnesium.
 METAL 185 185 Magnesium.
 METAL 187 187 Magnesium; via carbonyl oxygen.
 BINDING 26 26 Substrate.
 BINDING 66 66 Thiamine pyrophosphate.
 BINDING 156 156 Thiamine pyrophosphate; via amide
 BINDING 185 185 Thiamine pyrophosphate.
 BINDING 261 261 Substrate.
 BINDING 261 261 Thiamine pyrophosphate.
 BINDING 358 358 Substrate.
 BINDING 385 385 Substrate.
 BINDING 437 437 Thiamine pyrophosphate.
 BINDING 461 461 Substrate.
 BINDING 469 469 Substrate.
 BINDING 473 473 Substrate.
 BINDING 520 520 Substrate.
 MOD_RES 46 46 N6-acetyllysine.  
Keyword
 3D-structure; Acetylation; Calcium; Complete proteome; Magnesium; Metal-binding; Reference proteome; Thiamine pyrophosphate; Transferase. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 663 AA 
Protein Sequence
MSSRKELANA IRALSMDAVQ KAKSGHPGAP MGMADIAEVL WRDFLKHNPQ NPSWADRDRF 60
VLSNGHGSML IYSLLHLTGY DLPMEELKNF RQLHSKTPGH PEVGYTAGVE TTTGPLGQGI 120
ANAVGMAIAE KTLAAQFNRP GHDIVDHYTY AFMGDGCMME GISHEVCSLA GTLKLGKLIA 180
FYDDNGISID GHVEGWFTDD TAMRFEAYGW HVIRDIDGHD AASIKRAVEE ARAVTDKPSL 240
LMCKTIIGFG SPNKAGTHDS HGAPLGDAEI ALTREQLGWK YAPFEIPSEI YAQWDAKEAG 300
QAKESAWNEK FAAYAKAYPQ EAAEFTRRMK GEMPSDFDAK AKEFIAKLQA NPAKIASRKA 360
SQNAIEAFGP LLPEFLGGSA DLAPSNLTLW SGSKAINEDA AGNYIHYGVR EFGMTAIANG 420
ISLHGGFLPY TSTFLMFVEY ARNAVRMAAL MKQRQVMVYT HDSIGLGEDG PTHQPVEQVA 480
SLRVTPNMST WRPCDQVESA VAWKYGVERQ DGPTALILSR QNLAQQERTE EQLANIARGG 540
YVLKDCAGQP ELIFIATGSE VELAVAAYEK LTAEGVKARV VSMPSTDAFD KQDAAYRESV 600
LPKAVTARVA VEAGIADYWY KYVGLNGAIV GMTTFGESAP AELLFEEFGF TVDNVVAKAK 660
ELL 663 
Gene Ontology
 GO:0030145; F:manganese ion binding; IDA:EcoCyc.
 GO:0030976; F:thiamine pyrophosphate binding; IDA:EcoCyc.
 GO:0004802; F:transketolase activity; IDA:EcoCyc.
 GO:0009052; P:pentose-phosphate shunt, non-oxidative branch; IMP:EcoCyc. 
Interpro
 IPR009014; Transketo_C/Pyr-ferredox_oxred.
 IPR015941; Transketolase-like_C.
 IPR005475; Transketolase-like_Pyr-bd.
 IPR005478; Transketolase_bac-like.
 IPR020826; Transketolase_BS.
 IPR005476; Transketolase_C.
 IPR005474; Transketolase_N. 
Pfam
 PF02779; Transket_pyr
 PF02780; Transketolase_C
 PF00456; Transketolase_N 
SMART
 SM00861; Transket_pyr 
PROSITE
 PS00801; TRANSKETOLASE_1
 PS00802; TRANSKETOLASE_2 
PRINTS