CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-005082
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Upstream stimulatory factor 1 
Protein Synonyms/Alias
 Class B basic helix-loop-helix protein 11; bHLHb11; Major late transcription factor 1 
Gene Name
 USF1 
Gene Synonyms/Alias
 BHLHB11; USF 
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
214VERRRRDKINNWIVQubiquitination[1]
235DCSMESTKSGQSKGGacetylation[2]
235DCSMESTKSGQSKGGubiquitination[1]
246SKGGILSKACDYIQEacetylation[2]
246SKGGILSKACDYIQEubiquitination[1]
288QVEDLKNKNLLLRAQubiquitination[1]
Reference
 [1] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961]
 [2] A role of DNA-PK for the metabolic gene regulation in response to insulin.
 Wong RH, Chang I, Hudak CS, Hyun S, Kwan HY, Sul HS.
 Cell. 2009 Mar 20;136(6):1056-72. [PMID: 19303849
Functional Description
 Transcription factor that binds to a symmetrical DNA sequence (E-boxes) (5'-CACGTG-3') that is found in a variety of viral and cellular promoters. 
Sequence Annotation
 DOMAIN 199 254 bHLH.
 REGION 271 292 Leucine-zipper.  
Keyword
 3D-structure; Complete proteome; Direct protein sequencing; DNA-binding; Nucleus; Reference proteome; Transcription; Transcription regulation. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 310 AA 
Protein Sequence
MKGQQKTAET EEGTVQIQEG AVATGEDPTS VAIASIQSAA TFPDPNVKYV FRTENGGQVM 60
YRVIQVSEGQ LDGQTEGTGA ISGYPATQSM TQAVIQGAFT SDDAVDTEGT AAETHYTYFP 120
STAVGDGAGG TTSGSTAAVV TTQGSEALLG QATPPGTGQF FVMMSPQEVL QGGSQRSIAP 180
RTHPYSPKSE APRTTRDEKR RAQHNEVERR RRDKINNWIV QLSKIIPDCS MESTKSGQSK 240
GGILSKACDY IQELRQSNHR LSEELQGLDQ LQLDNDVLRQ QVEDLKNKNL LLRAQLRHHG 300
LEVVIKNDSN 310 
Gene Ontology
 GO:0005667; C:transcription factor complex; IDA:BHF-UCL.
 GO:0003690; F:double-stranded DNA binding; IEA:Compara.
 GO:0042803; F:protein homodimerization activity; TAS:BHF-UCL.
 GO:0003705; F:RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity; IDA:BHF-UCL.
 GO:0043565; F:sequence-specific DNA binding; IDA:BHF-UCL.
 GO:0032869; P:cellular response to insulin stimulus; IDA:BHF-UCL.
 GO:0042593; P:glucose homeostasis; TAS:BHF-UCL.
 GO:0006006; P:glucose metabolic process; IEA:Compara.
 GO:0019086; P:late viral mRNA transcription; IDA:BHF-UCL.
 GO:0055088; P:lipid homeostasis; ISS:BHF-UCL.
 GO:0051918; P:negative regulation of fibrinolysis; IC:BHF-UCL.
 GO:0000432; P:positive regulation of transcription from RNA polymerase II promoter by glucose; IMP:BHF-UCL.
 GO:0001666; P:response to hypoxia; IMP:BHF-UCL.
 GO:0009411; P:response to UV; ISS:BHF-UCL. 
Interpro
 IPR011598; bHLH_dom. 
Pfam
 PF00010; HLH 
SMART
 SM00353; HLH 
PROSITE
 PS50888; BHLH 
PRINTS