CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-035721
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
  
Protein Name
 Protein Chd1 
Protein Synonyms/Alias
  
Gene Name
 Chd1 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Rattus norvegicus (Rat) 
NCBI Taxa ID
 10116 
Lysine Modification
Position
Peptide
Type
References
725ALQKQYYKWILTRNYacetylation[1]
Reference
 [1] Proteomic analysis of lysine acetylation sites in rat tissues reveals organ specificity and subcellular patterns.
 Lundby A, Lage K, Weinert BT, Bekker-Jensen DB, Secher A, Skovgaard T, Kelstrup CD, Dmytriyev A, Choudhary C, Lundby C, Olsen JV.
 Cell Rep. 2012 Aug 30;2(2):419-31. [PMID: 22902405
Functional Description
  
Sequence Annotation
  
Keyword
 Complete proteome; Nucleus; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 1711 AA 
Protein Sequence
MNGHSDEESV RNGSGESSQS EDDSGSASGS GSGSSSGSSS DGSSSQSGSS DSDSGSDSGS 60
QSESESDTSR ENKVQAKPPK VDGAEFWKSN PSILAVQRSA MLRKQTQQPQ QQRPASSNSG 120
SEEDSSSSED SDASSSDVKR KKHNDEDWQM SGSGSPSQSG SDSESEDERD KSSCDGTESD 180
YEPKNKVKSR KPQNRSKSKS GKKILGQKKR QIDSSEDEDD EDYDNDKRSS RRQATVNVSY 240
KEDEEMKTDS DDLLEVCGED VPQTEDEEFE TIERFMDCRV GRKGATGATT TIYAIEADGD 300
PNAGFEKSKE PGDVQYLIKW KGWSHIHNTW ETEETLKQQN VRGMKKLDNY KKKDQETKRW 360
LKNASPEDVE YYNCQQELTD DLHKQYQIVE RIIAHSNQKS AAGLPDYYCK WQGLPYSECS 420
WEDGALISKK FQTCIDEYFS RNQSKTTPFK DCKVLKQRPR FVALKKQPSY IGGHEGLELR 480
DYQLNGLNWL AHSWCKGNSC ILADEMGLGK TIQTISFLNY LFHEHQLYGP FLLVVPLSTL 540
TSWQREIQTW ASQMNAVVYL GDINSRNMIR THEWMHPQTK RLKFNILLTT YEILLKDKAF 600
LGGLNWAFIG VDEAHRLKND DSLLYKTLID FKSNHRLLIT GTPLQNSLKE LWSLLHFIMP 660
EKFSSWEDFE EEHGKGREYG YASLHKELEP FLLRRVKKDV EKSLPAKVEQ ILRMEMSALQ 720
KQYYKWILTR NYKALSKGSK GSTSGFLNIM MELKKCCNHC YLIKPPDNNE FYNKQEALQH 780
LIRSSGKLIL LDKLLIRLRE RGNRVLIFSQ MVRMLDILAE YLKYRQFPFQ RLDGSIKGEL 840
RRQALDHFNA EGSEDFCFLL STRAGGLGIN LASADTVVIF DSDWNPQNDL QAQARAHRIG 900
QKKQVNIYRL VTKGSVEEDI LERAKKKMVL DHLVIQRMDT TGKTVLHTGS APSSSTPFNK 960
EELSAILKFG AEELFKEPEG EEQEPQEMDI DEILKRAETH ENEPGPLTVG DELLSQFKVA 1020
NFSNMDEDDI ELEPERNSKN WEDIIPEEQR RRLEEEERQK ELEEIYMLPR MRNCAKQISF 1080
NGSEGRRSRS RRYSGSDSDS ISERKRPKKR GRPRTIPREN IKGFSDAEIR RFIKSYKKFG 1140
GPLERLDAIA RDAELVDKSE TDLRRLGELV HNGCVKALKD SSSGTERAGG RLGKVKGPTF 1200
RISGVQVNAK LVIAHEDELI PLHKSIPSDP EERKQYTIPC HTKAAHFDID WGKEDDSNLL 1260
IGIYEYGYGS WEMIKMDPDL SLTHKILPDD PDKKPQAKQL QTRADYLIKL LSRDLAKKEA 1320
QRLSGAGGSK RRKTRAKKNK AMKSIKVKEE IKSDSSPLPS ERSEEEDDNV NDSKPESKDR 1380
SKKSVVSDAP VHITASGEPV PIAEESEELD QKTFSITTFI FRTLKKVLKN TWKPEKQIKL 1440
KSSRSRPRDK LVRLSDIVYQ CVPCCVSPHQ ISTWQINLWI FVSKFTEFDA RKLHKLYKHA 1500
IKKRQESQQN SDQNSNVPTT HVIRNPDMER LKENTNHDDS SRDGYSSDRH LSQCHDHHKD 1560
RHQGDSYKKS DSRKRPYSSF SNGKDHREWD HYRQDSRYYS DREKHRKLDD HRSREHRPSV 1620
EGSLKDRCHS DHRSHSDHRM HSDHRSSTEH THHKSSRDYR YLSDWQLDHR AASSGPRSPL 1680
DQRSPYGSRS PFEHSAEHRS TPEHTWSSRK T 1711 
Gene Ontology
 GO:0005634; C:nucleus; IEA:UniProtKB-KW.
 GO:0005524; F:ATP binding; IEA:InterPro.
 GO:0003677; F:DNA binding; IEA:InterPro.
 GO:0004386; F:helicase activity; IEA:InterPro. 
Interpro
 IPR023780; Chromo_domain.
 IPR000953; Chromo_domain/shadow.
 IPR016197; Chromodomain-like.
 IPR023779; Chromodomain_CS.
 IPR025260; DUF4208.
 IPR014001; Helicase_ATP-bd.
 IPR001650; Helicase_C.
 IPR027417; P-loop_NTPase.
 IPR000330; SNF2_N. 
Pfam
 PF00385; Chromo
 PF13907; DUF4208
 PF00271; Helicase_C
 PF00176; SNF2_N 
SMART
 SM00298; CHROMO
 SM00487; DEXDc
 SM00490; HELICc 
PROSITE
 PS00598; CHROMO_1
 PS50013; CHROMO_2
 PS51192; HELICASE_ATP_BIND_1
 PS51194; HELICASE_CTER 
PRINTS