CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-020417
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 UBX domain-containing protein 6 
Protein Synonyms/Alias
 UBX domain-containing protein 1 
Gene Name
 UBXN6 
Gene Synonyms/Alias
 UBXD1; UBXDC2 
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
32TIRNQVRKELQAEATubiquitination[1]
119NKDQDRVKLGVDTIAubiquitination[1]
127LGVDTIAKYLDNIHLubiquitination[1]
248NLTAEEIKREQRLRSubiquitination[1]
377AEPDSILKPELLSAIubiquitination[1]
Reference
 [1] Landscape of the PARKIN-dependent ubiquitylome in response to mitochondrial depolarization.
 Sarraf SA, Raman M, Guarani-Pereira V, Sowa ME, Huttlin EL, Gygi SP, Harper JW.
 Nature. 2013 Apr 18;496(7445):372-6. [PMID: 23503661
Functional Description
 Acts in a complex with VCP and cooperates with USP7 in promoting MDM2 deubiquitination and stabilization. MDM2 stabilization leads to MDM2-dependent TP53 degradation. 
Sequence Annotation
 DOMAIN 175 244 PUB.
 DOMAIN 332 408 UBX.
 MOD_RES 96 96 Phosphoserine.  
Keyword
 Alternative splicing; Complete proteome; Cytoplasm; Cytoskeleton; Nucleus; Phosphoprotein; Polymorphism; Reference proteome; Ubl conjugation pathway. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 441 AA 
Protein Sequence
MAAAAALARL EQKQSRAWGP TSQDTIRNQV RKELQAEATV SGSPEAPGTN VVSEPREEGS 60
AHLAVPGVYF TCPLTGATLR KDQRDACIKE AILLHFSTDP VAASIMKIYT FNKDQDRVKL 120
GVDTIAKYLD NIHLHPEEEK YRKIKLQNKV FQERINCLEG THEFFEAIGF QKVLLPAQDQ 180
EDPEEFYVLS ETTLAQPQSL ERHKEQLLAA EPVRAKLDRQ RRVFQPSPLA SQFELPGDFF 240
NLTAEEIKRE QRLRSEAVER LSVLRTKAMR EKEEQRGLRK YNYTLLRVRL PDGCLLQGTF 300
YARERLGAVY GFVREALQSD WLPFELLASG GQKLSEDENL ALNECGLVPS ALLTFSWDMA 360
VLEDIKAAGA EPDSILKPEL LSAIEKLL 388 
Gene Ontology
 GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
 GO:0005815; C:microtubule organizing center; IEA:UniProtKB-SubCell.
 GO:0005730; C:nucleolus; IDA:HPA. 
Interpro
 IPR018997; PUB_domain.
 IPR006567; PUG-dom.
 IPR001012; UBX. 
Pfam
 PF09409; PUB
 PF00789; UBX 
SMART
 SM00580; PUG
 SM00166; UBX 
PROSITE
 PS50033; UBX 
PRINTS