CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-037305
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
  
Protein Name
 PAP-associated domain-containing protein 5 
Protein Synonyms/Alias
  
Gene Name
 PAPD5 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
109VYSGTPWKRRNYNQGubiquitination[1]
214DSVKVLDKATVPIIKubiquitination[1, 2]
342DGGSYVAKDEVQKNMubiquitination[1]
Reference
 [1] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961]
 [2] Integrated proteomic analysis of post-translational modifications by serial enrichment.
 Mertins P, Qiao JW, Patel J, Udeshi ND, Clauser KR, Mani DR, Burgess MW, Gillette MA, Jaffe JD, Carr SA.
 Nat Methods. 2013 Jul;10(7):634-7. [PMID: 23749302] 
Functional Description
  
Sequence Annotation
  
Keyword
 Complete proteome; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 619 AA 
Protein Sequence
MYRSGERLLG SHALPAEQRD FLPLETTNNN NNHHQPGAWA RRAGSSASSP PSASSSPHPS 60
AAVPAADPAD SASGSSNKRK RDNKPSGGRA AGGGRADGGG VVYSGTPWKR RNYNQGVVGL 120
HEEISDFYEY MSPRPEEEKM RMEVVNRIES VIKELWPSAD VQIFGSFKTG LYLPTSDIDL 180
VVFGKWENLP LWTLEEALRK HKVADEDSVK VLDKATVPII KLTDSFTEVK VDISFNVQNG 240
VRAADLIKDF TKKYPVLPYL VLVLKQFLLQ RDLNEVFTGG IGSYSLFLMA VSFLQLHPRE 300
DACIPNTNYG VLLIEFFELY GRHFNYLKTG IRIKDGGSYV AKDEVQKNML DGYRPSMLYI 360
EDPLQPGNDV GRSSYGAMQV KQAFDYAYVV LSHAVSPIAK YYPNNETESI LGRIIRVTDE 420
VATYRDWISK QWGLKNRPEP SCNGNGVTLI VDTQQLDKCN NNLSEENEAL GKCRSKTSES 480
LSKHSSNSSS GPVSSSSATQ SSSSDVDSDA TPCKTPKQLL CRPSTGNRVG SQDVSLESSQ 540
AVGKMQSTQT TNTSNSTNKS QHGSARLFRS SSKGFQGTTQ TSHGSLMTNK QHQGKSNNQY 600
YHGKKRKHKR DAPLSDLCR 619 
Gene Ontology
 GO:0016779; F:nucleotidyltransferase activity; IEA:InterPro. 
Interpro
 IPR002934; Nucleotidyltransferase.
 IPR002058; PAP_assoc. 
Pfam
 PF01909; NTP_transf_2
 PF03828; PAP_assoc 
SMART
  
PROSITE
  
PRINTS