CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-008543
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Ephrin-B2 
Protein Synonyms/Alias
 EPH-related receptor tyrosine kinase ligand 5; LERK-5; HTK ligand; HTK-L 
Gene Name
 EFNB2 
Gene Synonyms/Alias
 EPLG5; HTKL; LERK5 
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
332SPANIYYKV******ubiquitination[1, 2, 3]
Reference
 [1] Systematic and quantitative assessment of the ubiquitin-modified proteome.
 Kim W, Bennett EJ, Huttlin EL, Guo A, Li J, Possemato A, Sowa ME, Rad R, Rush J, Comb MJ, Harper JW, Gygi SP.
 Mol Cell. 2011 Oct 21;44(2):325-40. [PMID: 21906983]
 [2] Global identification of modular cullin-RING ligase substrates.
 Emanuele MJ, Elia AE, Xu Q, Thoma CR, Izhar L, Leng Y, Guo A, Chen YN, Rush J, Hsu PW, Yen HC, Elledge SJ.
 Cell. 2011 Oct 14;147(2):459-74. [PMID: 21963094]
 [3] Landscape of the PARKIN-dependent ubiquitylome in response to mitochondrial depolarization.
 Sarraf SA, Raman M, Guarani-Pereira V, Sowa ME, Huttlin EL, Gygi SP, Harper JW.
 Nature. 2013 Apr 18;496(7445):372-6. [PMID: 23503661
Functional Description
 Cell surface transmembrane ligand for Eph receptors, a family of receptor tyrosine kinases which are crucial for migration, repulsion and adhesion during neuronal, vascular and epithelial development. Binds promiscuously Eph receptors residing on adjacent cells, leading to contact-dependent bidirectional signaling into neighboring cells. The signaling pathway downstream of the receptor is referred to as forward signaling while the signaling pathway downstream of the ephrin ligand is referred to as reverse signaling. Binds to receptor tyrosine kinase including EPHA4, EPHA3 and EPHB4. Together with EPHB4 plays a central role in heart morphogenesis and angiogenesis through regulation of cell adhesion and cell migration. EPHB4-mediated forward signaling controls cellular repulsion and segregation from EFNB2-expressing cells. May play a role in constraining the orientation of longitudinally projecting axons. 
Sequence Annotation
 DOMAIN 28 164 Ephrin RBD.
 MOTIF 331 333 PDZ-binding (Potential).
 CARBOHYD 36 36 N-linked (GlcNAc...) (Potential).
 CARBOHYD 139 139 N-linked (GlcNAc...) (Potential).
 DISULFID 62 101
 DISULFID 89 153  
Keyword
 3D-structure; Angiogenesis; Complete proteome; Developmental protein; Differentiation; Disulfide bond; Glycoprotein; Host-virus interaction; Membrane; Neurogenesis; Phosphoprotein; Reference proteome; Signal; Transmembrane; Transmembrane helix. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 333 AA 
Protein Sequence
MAVRRDSVWK YCWGVLMVLC RTAISKSIVL EPIYWNSSNS KFLPGQGLVL YPQIGDKLDI 60
ICPKVDSKTV GQYEYYKVYM VDKDQADRCT IKKENTPLLN CAKPDQDIKF TIKFQEFSPN 120
LWGLEFQKNK DYYIISTSNG SLEGLDNQEG GVCQTRAMKI LMKVGQDASS AGSTRNKDPT 180
RRPELEAGTN GRSSTTSPFV KPNPGSSTDG NSAGHSGNNI LGSEVALFAG IASGCIIFIV 240
IIITLVVLLL KYRRRHRKHS PQHTTTLSLS TLATPKRSGN NNGSEPSDII IPLRTADSVF 300
CPHYEKVSGD YGHPVYIVQE MPPQSPANIY YKV 333 
Gene Ontology
 GO:0005887; C:integral to plasma membrane; TAS:ProtInc.
 GO:0046875; F:ephrin receptor binding; TAS:ProtInc.
 GO:0007155; P:cell adhesion; IDA:UniProtKB.
 GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.
 GO:0002042; P:cell migration involved in sprouting angiogenesis; IDA:UniProtKB.
 GO:0007267; P:cell-cell signaling; TAS:ProtInc.
 GO:0048013; P:ephrin receptor signaling pathway; IDA:UniProtKB.
 GO:0001945; P:lymph vessel development; IEA:Compara.
 GO:0007399; P:nervous system development; IEA:UniProtKB-KW.
 GO:0009887; P:organ morphogenesis; IEA:Compara.
 GO:2000727; P:positive regulation of cardiac muscle cell differentiation; ISS:BHF-UCL.
 GO:0050920; P:regulation of chemotaxis; IDA:UniProtKB.
 GO:0019048; P:virus-host interaction; IEA:UniProtKB-KW. 
Interpro
 IPR008972; Cupredoxin.
 IPR001799; Ephrin.
 IPR019765; Ephrin_CS. 
Pfam
 PF00812; Ephrin 
SMART
  
PROSITE
 PS01299; EPHRIN_RBD_1
 PS51551; EPHRIN_RBD_2 
PRINTS
 PR01347; EPHRIN.