UniProt Accession

 SDC4_RAT; P34901 

Genbank Protein ID

 M81786; S61868 

Genbank Nucleotide ID

 AAA73167.1; AAB26725.1 

Protein Name

 Syndecan-4 

Protein Synonyms/Alias

 SYND4; Ryudocan core protein 

Gene Name

 Sdc4 

Gene Synonyms/Alias

 Synd4 

Created Date

 July 27, 2013 

Organism

 Rattus norvegicus (Rat) 

NCBI Taxa ID

 10116 

Lysine Modification

Position	Peptide	Type	References
194	GKKPIYKKAPTNEFY	ubiquitination	[1]

Reference

 [1] Synaptic protein ubiquitination in rat brain revealed by antibody-based ubiquitome analysis.
 Na CH, Jones DR, Yang Y, Wang X, Xu Y, Peng J.
 J Proteome Res. 2012 Sep 7;11(9):4722-32. [PMID: 22871113] 

Functional Description

 Cell surface proteoglycan that bears heparan sulfate. 

Sequence Annotation

 CARBOHYD 44 44 O-linked (Xyl...) (heparan sulfate)
 CARBOHYD 65 65 O-linked (Xyl...) (heparan sulfate)
 CARBOHYD 67 67 O-linked (Xyl...) (heparan sulfate)  

Keyword

 Complete proteome; Direct protein sequencing; Glycoprotein; Heparan sulfate; Membrane; Proteoglycan; Reference proteome; Secreted; Signal; Transmembrane; Transmembrane helix. 

Sequence Source

 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 

Protein Length

 202 AA 

Protein Sequence

Gene Ontology

 GO:0009986; C:cell surface; IDA:RGD.
 GO:0043034; C:costamere; IDA:RGD.
 GO:0005576; C:extracellular region; IEA:UniProtKB-SubCell.
 GO:0005925; C:focal adhesion; IDA:RGD.
 GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
 GO:0045121; C:membrane raft; IDA:RGD.
 GO:0001968; F:fibronectin binding; IDA:RGD.
 GO:0005080; F:protein kinase C binding; IDA:RGD.
 GO:0070053; F:thrombospondin receptor activity; IEA:Compara.
 GO:0007155; P:cell adhesion; NAS:RGD.
 GO:0007267; P:cell-cell signaling; NAS:RGD.
 GO:0051894; P:positive regulation of focal adhesion assembly; IMP:RGD.
 GO:0045860; P:positive regulation of protein kinase activity; IMP:RGD.
 GO:0051496; P:positive regulation of stress fiber assembly; IMP:RGD.
 GO:0001657; P:ureteric bud development; IEP:RGD. 

Interpro

 IPR003585; Neurexin-like.
 IPR001050; Syndecan. 

Pfam

 PF01034; Syndecan 

SMART

 SM00294; 4.1m 

PROSITE

 PS00964; SYNDECAN 

PRINTS