CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-041489
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Protein RT1-M3-1 
Protein Synonyms/Alias
 RT1 class Ib, locus M3, isoform CRA_a 
Gene Name
 RT1-M3-1 
Gene Synonyms/Alias
 RT1-M3; rCG_58606 
Created Date
 July 27, 2013 
Organism
 Rattus norvegicus (Rat) 
NCBI Taxa ID
 10116 
Lysine Modification
Position
Peptide
Type
References
200HRFLQNGKEILQRADacetylation[1]
Reference
 [1] Proteomic analysis of lysine acetylation sites in rat tissues reveals organ specificity and subcellular patterns.
 Lundby A, Lage K, Weinert BT, Bekker-Jensen DB, Secher A, Skovgaard T, Kelstrup CD, Dmytriyev A, Choudhary C, Lundby C, Olsen JV.
 Cell Rep. 2012 Aug 30;2(2):419-31. [PMID: 22902405] 
Functional Description
  
Sequence Annotation
  
Keyword
 Complete proteome; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 339 AA 
Protein Sequence
MATSNKFSLL LMVVVALAVS RTGAGTHSLR YFHTALSRPG RGEPQYISVG YVDDKLFQRC 60
DSVEEIPRME ARAPWMEKEG PEYWEELKLK VKSIAQRARA RLRTLIRYYN QSEGSSHILQ 120
WMVACEVGPD MRLLGAHYQA AYDGSDYITL NEDLSSWTAA DMVAQITKSE LESEGRAEYF 180
RAYVDGECLE LLHRFLQNGK EILQRADPPK AHVTLHPRPE GDVTLRCWAL GFYPADITLT 240
WQLNGEDLTQ DMELVETKPS GDGTFQKWAS VVVPSGEEQK YTCHVEHEGL PEPLVLKWGG 300
SSQSFVVIMV IIVIIVILAL LGGVLTVVLV YRRRGAGML 339 
Gene Ontology
 GO:0009897; C:external side of plasma membrane; IEA:Compara.
 GO:0042612; C:MHC class I protein complex; IEA:InterPro.
 GO:0032398; C:MHC class Ib protein complex; IEA:Compara.
 GO:0042605; F:peptide antigen binding; IEA:Compara.
 GO:0002287; P:alpha-beta T cell activation involved in immune response; IEA:Compara.
 GO:0002476; P:antigen processing and presentation of endogenous peptide antigen via MHC class Ib; IEA:Compara.
 GO:0002481; P:antigen processing and presentation of exogenous protein antigen via MHC class Ib, TAP-dependent; IEA:Compara.
 GO:0042742; P:defense response to bacterium; IEA:Compara.
 GO:0032729; P:positive regulation of interferon-gamma production; IEA:Compara.
 GO:0045954; P:positive regulation of natural killer cell mediated cytotoxicity; IEA:Compara.
 GO:0045429; P:positive regulation of nitric oxide biosynthetic process; IEA:Compara.
 GO:0001916; P:positive regulation of T cell mediated cytotoxicity; IEA:Compara.
 GO:0002237; P:response to molecule of bacterial origin; IEA:Compara. 
Interpro
 IPR007110; Ig-like_dom.
 IPR013783; Ig-like_fold.
 IPR003006; Ig/MHC_CS.
 IPR003597; Ig_C1-set.
 IPR011161; MHC_I-like_Ag-recog.
 IPR011162; MHC_I/II-like_Ag-recog.
 IPR001039; MHC_I_a_a1/a2. 
Pfam
 PF07654; C1-set
 PF00129; MHC_I 
SMART
 SM00407; IGc1 
PROSITE
 PS50835; IG_LIKE
 PS00290; IG_MHC 
PRINTS
 PR01638; MHCCLASSI.