CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-003350
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 DNA-binding protein HU-alpha 
Protein Synonyms/Alias
 HU-2; NS2 
Gene Name
 hupA 
Gene Synonyms/Alias
 b4000; JW3964 
Created Date
 July 27, 2013 
Organism
 Escherichia coli (strain K12) 
NCBI Taxa ID
 83333 
Lysine Modification
Position
Peptide
Type
References
3*****MNKTQLIDVIacetylation[1]
13LIDVIAEKAELSKTQacetylation[1, 2]
18AEKAELSKTQAKAALacetylation[1]
22ELSKTQAKAALESTLacetylation[1]
51LVGFGTFKVNHRAERacetylation[1]
67GRNPQTGKEIKIAAAacetylation[1]
70PQTGKEIKIAAANVPacetylation[1]
83VPAFVSGKALKDAVKacetylation[1]
86FVSGKALKDAVK***acetylation[1]
Reference
 [1] Acetyl-Phosphate Is a Critical Determinant of Lysine Acetylation in E. coli.
 Weinert BT, Iesmantavicius V, Wagner SA, Schölz C, Gummesson B, Beli P, Nyström T, Choudhary C.
 Mol Cell. 2013 Jul 25;51(2):265-72. [PMID: 23830618]
 [2] Comprehensive profiling of protein lysine acetylation in Escherichia coli.
 Zhang K, Zheng S, Yang JS, Chen Y, Cheng Z.
 J Proteome Res. 2013 Feb 1;12(2):844-51. [PMID: 23294111
Functional Description
 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. 
Sequence Annotation
  
Keyword
 3D-structure; Complete proteome; Direct protein sequencing; DNA condensation; DNA-binding; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 90 AA 
Protein Sequence
MNKTQLIDVI AEKAELSKTQ AKAALESTLA AITESLKEGD AVQLVGFGTF KVNHRAERTG 60
RNPQTGKEIK IAAANVPAFV SGKALKDAVK 90 
Gene Ontology
 GO:0016020; C:membrane; IDA:UniProtKB.
 GO:0003677; F:DNA binding; IDA:EcoliWiki.
 GO:0030261; P:chromosome condensation; IEA:UniProtKB-KW.
 GO:0006974; P:response to DNA damage stimulus; IEP:EcoliWiki.
 GO:0006351; P:transcription, DNA-dependent; IDA:EcoCyc. 
Interpro
 IPR023630; DNA-bd_HU/IHF.
 IPR000119; Hist_DNA-bd_bac.
 IPR020816; Histone-like_DNA-bd_CS.
 IPR010992; IHF-like_DNA-bd_dom. 
Pfam
 PF00216; Bac_DNA_binding 
SMART
 SM00411; BHL 
PROSITE
 PS00045; HISTONE_LIKE 
PRINTS
 PR01727; DNABINDINGHU.