CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-002208
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 HTH-type transcriptional regulator AppY 
Protein Synonyms/Alias
 M5 polypeptide 
Gene Name
 appY 
Gene Synonyms/Alias
 b0564; JW0553 
Created Date
 July 27, 2013 
Organism
 Escherichia coli (strain K12) 
NCBI Taxa ID
 83333 
Lysine Modification
Position
Peptide
Type
References
36SLFIVSDKIRRELPVacetylation[1]
47ELPVCPSKLRIVDIDacetylation[1]
55LRIVDIDKKTCLSFFacetylation[1]
Reference
 [1] Acetyl-Phosphate Is a Critical Determinant of Lysine Acetylation in E. coli.
 Weinert BT, Iesmantavicius V, Wagner SA, Schölz C, Gummesson B, Beli P, Nyström T, Choudhary C.
 Mol Cell. 2013 Jul 25;51(2):265-72. [PMID: 23830618
Functional Description
 Induces the synthesis of acid phosphatase (AppA) and several other polypeptides (such as AppBC) during the deceleration phase of growth. It also acts as a transcriptional repressor for one group of proteins that are synthesized preferentially in exponential growth and for one group synthesized only in the stationary phase. Also involved in the stabilization of the sigma stress factor RpoS during stress conditions. 
Sequence Annotation
 DNA_BIND 155 174 H-T-H motif (By similarity).  
Keyword
 Complete proteome; DNA-binding; Reference proteome; Repressor; Transcription; Transcription regulation. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 249 AA 
Protein Sequence
MDYVCSVVFI CQSFDLIINR RVISFKKNSL FIVSDKIRRE LPVCPSKLRI VDIDKKTCLS 60
FFIDVNNELP GKFTLDKNGY IAEEEPPLSL VFSLFEGIKI ADSHSLWLKE RLCISLLAMF 120
KKRESVNSFI LTNINTFTCK ITGIISFNIE RQWHLKDIAE LIYTSESLIK KRLRDEGTSF 180
TEILRDTRMR YAKKLITSNS YSINVVAQKC GYNSTSYFIC AFKDYYGVTP SHYFEKIIGV 240
TDGINKTID 249 
Gene Ontology
 GO:0005622; C:intracellular; IEA:InterPro.
 GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
 GO:0003700; F:sequence-specific DNA binding transcription factor activity; IDA:EcoCyc.
 GO:0016036; P:cellular response to phosphate starvation; IDA:EcoCyc.
 GO:0045893; P:positive regulation of transcription, DNA-dependent; IDA:EcoCyc.
 GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. 
Interpro
 IPR009057; Homeodomain-like.
 IPR018060; HTH_AraC.
 IPR018062; HTH_AraC-typ_CS.
 IPR020449; Tscrpt_reg_HTH_AraC-type. 
Pfam
 PF12833; HTH_18 
SMART
 SM00342; HTH_ARAC 
PROSITE
 PS00041; HTH_ARAC_FAMILY_1
 PS01124; HTH_ARAC_FAMILY_2 
PRINTS
 PR00032; HTHARAC.