CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-015650
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 50S ribosomal protein L16 
Protein Synonyms/Alias
  
Gene Name
 rplP 
Gene Synonyms/Alias
 DVU_1310 
Created Date
 July 27, 2013 
Organism
 Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIM 
NCBI Taxa ID
 882 
Lysine Modification
Position
Peptide
Type
References
107GRVLYEIKGVSLELAmethylation[1]
Reference
 [1] Post-translational modifications of Desulfovibrio vulgaris Hildenborough sulfate reduction pathway proteins.
 Gaucher SP, Redding AM, Mukhopadhyay A, Keasling JD, Singh AK.
 J Proteome Res. 2008 Jun;7(6):2320-31. [PMID: 18416566
Functional Description
 Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs (By similarity). 
Sequence Annotation
  
Keyword
 Complete proteome; Reference proteome; Ribonucleoprotein; Ribosomal protein; RNA-binding; rRNA-binding; tRNA-binding. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 137 AA 
Protein Sequence
MLSPRKVKFR KWQKGRNKGV ATRGATVAFG DIGLKAIEHG KLTSQQIEAA RIAMMRHIKR 60
GGKVWIRIFP DRPVTAKPLE TRQGSGKGSP VGWCAPVKPG RVLYEIKGVS LELAKEALTR 120
AAHKLPVKTV IVVREGV 137 
Gene Ontology
 GO:0005840; C:ribosome; IEA:UniProtKB-KW.
 GO:0019843; F:rRNA binding; IEA:HAMAP.
 GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
 GO:0000049; F:tRNA binding; IEA:UniProtKB-KW.
 GO:0006412; P:translation; IEA:HAMAP. 
Interpro
 IPR016180; Ribosomal_L10e/L16.
 IPR000114; Ribosomal_L16.
 IPR020798; Ribosomal_L16_CS. 
Pfam
 PF00252; Ribosomal_L16 
SMART
  
PROSITE
 PS00586; RIBOSOMAL_L16_1
 PS00701; RIBOSOMAL_L16_2 
PRINTS
 PR00060; RIBOSOMALL16.