CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-041732
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 RNA-binding protein 42 
Protein Synonyms/Alias
 Similar to RIKEN cDNA 3100004P22 
Gene Name
 Rbm42 
Gene Synonyms/Alias
 RGD1306184; rCG_53925 
Created Date
 July 27, 2013 
Organism
 Rattus norvegicus (Rat) 
NCBI Taxa ID
 10116 
Lysine Modification
Position
Peptide
Type
References
32PGVGIPGKSGEERLKacetylation[1]
Reference
 [1] Proteomic analysis of lysine acetylation sites in rat tissues reveals organ specificity and subcellular patterns.
 Lundby A, Lage K, Weinert BT, Bekker-Jensen DB, Secher A, Skovgaard T, Kelstrup CD, Dmytriyev A, Choudhary C, Lundby C, Olsen JV.
 Cell Rep. 2012 Aug 30;2(2):419-31. [PMID: 22902405] 
Functional Description
  
Sequence Annotation
  
Keyword
 Complete proteome; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 478 AA 
Protein Sequence
MASAMAGAGP APGLPVAGGP VVPGPGVGIP GKSGEERLKE MEAEMALFEQ EVLGAPVTGI 60
PTAVPAVPTV EAMQVPPAPV IRPIIATNTY QQVQQTLEAR AAAAATVVPP MVGGPPFVGP 120
VGFGPADRSH LDSPEAREAM FLRRAAVAPQ RAPILRPAFV PHVLQRADSA LSSAAGGPRP 180
MALRPPHQAL VGPPLPGPPG PPMMLPPMAR APGPPLGSMA ALRPPLEEPA APRDLGLGLG 240
LGLKEKEEAV VAAAAGLEEA SAAVAVGAGG APAGPAVIGP SLPLALAMPL PEPEPLPLPL 300
EVVRGLLPPL RIPELLSLRP RPRPPRPEPP PGLMALEVPE PLGEDKKKGK PEKLKRCIRT 360
AAGSSWEDPS LLEWDADDFR IFCGDLGNEV NDDILARAFS RFPSFLKAKV IRDKRTGKTK 420
GYGFVSFKDP SDYVRAMREM NGKYVGSRPI KLRKSMWKDR NLDVVRKKQK EKKKLGLR 478 
Gene Ontology
 GO:0003676; F:nucleic acid binding; IEA:InterPro.
 GO:0000166; F:nucleotide binding; IEA:InterPro. 
Interpro
 IPR012677; Nucleotide-bd_a/b_plait.
 IPR000504; RRM_dom. 
Pfam
 PF00076; RRM_1 
SMART
 SM00360; RRM 
PROSITE
 PS50102; RRM 
PRINTS