CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-009884
UniProt Accession
Genbank Protein ID
 X17141 
Genbank Nucleotide ID
Protein Name
 Histone H3 
Protein Synonyms/Alias
 H3S; Major histone H3; H3F 
Gene Name
  
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Tetrahymena pyriformis 
NCBI Taxa ID
 5908 
Lysine Modification
Position
Peptide
Type
References
10RTKQTARKSTGAKAPacetylation[1]
15ARKSTGAKAPRKQLAacetylation[1]
19TGAKAPRKQLASKAAacetylation[1]
24PRKQLASKAARKSAPacetylation[1]
Reference
 [1] Tetrahymena histone H3. Purification and two variant sequences.
 Hayashi T, Hayashi H, Fusauchi Y, Iwai K.
 J Biochem. 1984 Jun;95(6):1741-9. [PMID: 6432775
Functional Description
 Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. 
Sequence Annotation
 MOD_RES 5 5 N6,N6,N6-trimethyllysine; alternate (By
 MOD_RES 5 5 N6,N6-dimethyllysine; alternate (By
 MOD_RES 5 5 N6-acetyllysine; alternate (By
 MOD_RES 5 5 N6-methyllysine; alternate (By
 MOD_RES 10 10 N6,N6,N6-trimethyllysine; alternate (By
 MOD_RES 10 10 N6-acetyllysine; alternate.
 MOD_RES 11 11 Phosphoserine (By similarity).
 MOD_RES 15 15 N6-acetyllysine.
 MOD_RES 19 19 N6-acetyllysine.
 MOD_RES 24 24 N6-acetyllysine.
 MOD_RES 28 28 N6,N6,N6-trimethyllysine; alternate (By
 MOD_RES 28 28 N6,N6-dimethyllysine; alternate (By
 MOD_RES 28 28 N6-acetyllysine; alternate (By
 MOD_RES 28 28 N6-methyllysine; alternate (By
 MOD_RES 37 37 N6,N6,N6-trimethyllysine; alternate (By
 MOD_RES 37 37 N6,N6-dimethyllysine; alternate (By
 MOD_RES 37 37 N6-acetyllysine; alternate (By
 MOD_RES 37 37 N6-methyllysine; alternate (By
 MOD_RES 57 57 N6-acetyllysine; alternate (By
 MOD_RES 57 57 N6-methyllysine; alternate (By
 MOD_RES 80 80 N6-methyllysine (By similarity).  
Keyword
 Acetylation; Chromosome; Direct protein sequencing; DNA-binding; Methylation; Nucleosome core; Nucleus; Phosphoprotein. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 136 AA 
Protein Sequence
MARTKQTARK STGAKAPRKQ LASKAARKSA PATGGIKKPH RFRPGTVALR EIRKYQKSTD 60
LLIRKLPFQR LVRDIAHEFK AELRFQSSAV LALQEAAEAY LVGLFEDTNL CAIHARRVTI 120
MTKDMQLARR IRGERF 136 
Gene Ontology
 GO:0000786; C:nucleosome; IEA:UniProtKB-KW.
 GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
 GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
 GO:0006334; P:nucleosome assembly; IEA:InterPro. 
Interpro
 IPR009072; Histone-fold.
 IPR007125; Histone_core_D.
 IPR000164; Histone_H3. 
Pfam
 PF00125; Histone 
SMART
 SM00428; H3 
PROSITE
 PS00322; HISTONE_H3_1
 PS00959; HISTONE_H3_2 
PRINTS
 PR00622; HISTONEH3.