CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-007984
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Cytochrome b-c1 complex subunit Rieske, mitochondrial 
Protein Synonyms/Alias
 Complex III subunit 5; Cytochrome b-c1 complex subunit 5; Rieske iron-sulfur protein; RISP; Ubiquinol-cytochrome c reductase iron-sulfur subunit; Cytochrome b-c1 complex subunit 11; Complex III subunit IX; Ubiquinol-cytochrome c reductase 8 kDa protein 
Gene Name
 UQCRFS1 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
163LSDIPEGKNMAFKWRubiquitination[1, 2]
168EGKNMAFKWRGKPLFubiquitination[1, 2]
182FVRHRTQKEIEQEAAubiquitination[3]
Reference
 [1] A proteome-wide, quantitative survey of in vivo ubiquitylation sites reveals widespread regulatory roles.
 Wagner SA, Beli P, Weinert BT, Nielsen ML, Cox J, Mann M, Choudhary C.
 Mol Cell Proteomics. 2011 Oct;10(10):M111.013284. [PMID: 21890473]
 [2] hCKSAAP_UbSite: improved prediction of human ubiquitination sites by exploiting amino acid pattern and properties.
 Chen Z, Zhou Y, Song J, Zhang Z.
 Biochim Biophys Acta. 2013 Aug;1834(8):1461-7. [PMID: 23603789]
 [3] Systematic and quantitative assessment of the ubiquitin-modified proteome.
 Kim W, Bennett EJ, Huttlin EL, Guo A, Li J, Possemato A, Sowa ME, Rad R, Rush J, Comb MJ, Harper JW, Gygi SP.
 Mol Cell. 2011 Oct 21;44(2):325-40. [PMID: 21906983
Functional Description
 Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. 
Sequence Annotation
 DOMAIN 187 272 Rieske.
 METAL 217 217 Iron-sulfur (2Fe-2S) (By similarity).
 METAL 219 219 Iron-sulfur (2Fe-2S); via pros nitrogen
 METAL 236 236 Iron-sulfur (2Fe-2S) (By similarity).
 METAL 239 239 Iron-sulfur (2Fe-2S); via pros nitrogen
 DISULFID 222 238 By similarity.  
Keyword
 2Fe-2S; Complete proteome; Direct protein sequencing; Disulfide bond; Electron transport; Iron; Iron-sulfur; Membrane; Metal-binding; Mitochondrion; Mitochondrion inner membrane; Oxidoreductase; Polymorphism; Reference proteome; Respiratory chain; Transit peptide; Transmembrane; Transmembrane helix; Transport. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 274 AA 
Protein Sequence
MLSVASRSGP FAPVLSATSR GVAGALRPLV QATVPATPEQ PVLDLKRPFL SRESLSGQAV 60
RRPLVASVGL NVPASVCYSH TDIKVPDFSE YRRLEVLDST KSSRESSEAR KGFSYLVTGV 120
TTVGVAYAAK NAVTQFVSSM SASADVLALA KIEIKLSDIP EGKNMAFKWR GKPLFVRHRT 180
QKEIEQEAAV ELSQLRDPQH DLDRVKKPEW VILIGVCTHL GCVPIANAGD FGGYYCPCHG 240
SHYDASGRIR LGPAPLNLEV PTYEFTSDDM VIVG 274 
Gene Ontology
 GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
 GO:0005750; C:mitochondrial respiratory chain complex III; NAS:UniProtKB.
 GO:0051537; F:2 iron, 2 sulfur cluster binding; IEA:UniProtKB-KW.
 GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
 GO:0008121; F:ubiquinol-cytochrome-c reductase activity; NAS:UniProtKB.
 GO:0022904; P:respiratory electron transport chain; TAS:Reactome.
 GO:0046677; P:response to antibiotic; IEA:Compara.
 GO:0042493; P:response to drug; IEA:Compara.
 GO:0009725; P:response to hormone stimulus; IEA:Compara.
 GO:0044281; P:small molecule metabolic process; TAS:Reactome. 
Interpro
 IPR011070; Globular_prot_asu/bsu.
 IPR017941; Rieske_2Fe-2S.
 IPR014349; Rieske_Fe-S_prot.
 IPR005805; Rieske_Fe-S_prot_C.
 IPR015248; Ubiqinol_cyt_c_Rdtase_N.
 IPR006317; Ubiquinol_cyt_c_Rdtase_Fe-S-su.
 IPR004192; Ubiquinol_cyt_Rdtase_TM. 
Pfam
 PF00355; Rieske
 PF09165; Ubiq-Cytc-red_N
 PF02921; UCR_TM 
SMART
  
PROSITE
 PS51296; RIESKE 
PRINTS
 PR00162; RIESKE.