CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-030956
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Transcriptional repressor p66-alpha 
Protein Synonyms/Alias
 cDNA FLJ55704, highly similar to Transcriptional repressor p66 alpha 
Gene Name
 GATAD2A 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
60GGQQASSKLGPQASSubiquitination[1, 2]
249PYMCAQCKTDFTCRWubiquitination[1, 2]
260TCRWREEKSGAIMCEubiquitination[1, 2]
292RLKAAFVKALQQEQEubiquitination[1, 2, 3, 4, 5]
315GTAPAQAKAEPTAAPubiquitination[1, 2, 5]
353HTFSPSPKLQNSASAubiquitination[1]
379ERTVSAGKGSATSNWubiquitination[1]
Reference
 [1] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961]
 [2] Integrated proteomic analysis of post-translational modifications by serial enrichment.
 Mertins P, Qiao JW, Patel J, Udeshi ND, Clauser KR, Mani DR, Burgess MW, Gillette MA, Jaffe JD, Carr SA.
 Nat Methods. 2013 Jul;10(7):634-7. [PMID: 23749302]
 [3] A proteome-wide, quantitative survey of in vivo ubiquitylation sites reveals widespread regulatory roles.
 Wagner SA, Beli P, Weinert BT, Nielsen ML, Cox J, Mann M, Choudhary C.
 Mol Cell Proteomics. 2011 Oct;10(10):M111.013284. [PMID: 21890473]
 [4] Systematic and quantitative assessment of the ubiquitin-modified proteome.
 Kim W, Bennett EJ, Huttlin EL, Guo A, Li J, Possemato A, Sowa ME, Rad R, Rush J, Comb MJ, Harper JW, Gygi SP.
 Mol Cell. 2011 Oct 21;44(2):325-40. [PMID: 21906983]
 [5] Global identification of modular cullin-RING ligase substrates.
 Emanuele MJ, Elia AE, Xu Q, Thoma CR, Izhar L, Leng Y, Guo A, Chen YN, Rush J, Hsu PW, Yen HC, Elledge SJ.
 Cell. 2011 Oct 14;147(2):459-74. [PMID: 21963094
Functional Description
  
Sequence Annotation
  
Keyword
 Complete proteome; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 436 AA 
Protein Sequence
MIKQLKEELR LEEAKLVLLK KLRQSQIQKE ATAQKTSSAR MPGSVIPPPL VRGGQQASSK 60
LGPQASSQVV MPPLVRGAQQ IHSIRQHSST GPPPLLLAPR ASVPSVQIQG QRIIQQGLIR 120
VANVPNTSLL VNIPQPTPAS LKGTTATSAQ ANSTPTSVAS VVTSAESPAS RQAAAKLALR 180
KQLEKTLLEI PPPKPPAPEM NFLPSAANNE FIYLVGLEEV VQNLLETQAG RMSAATVLSR 240
EPYMCAQCKT DFTCRWREEK SGAIMCENCM TTNQKKALKV EHTSRLKAAF VKALQQEQEI 300
EQRLLQQGTA PAQAKAEPTA APHPVLKQAS SQLSRGSATT PRGVLHTFSP SPKLQNSASA 360
TALVSRTGRH SERTVSAGKG SATSNWKKTP LSTGGTLAFV SPSLAVHKSS SAVDRQREYL 420
LDMIPPRSIP QSATWK 436 
Gene Ontology
 GO:0005634; C:nucleus; IDA:HPA.
 GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
 GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.
 GO:0008270; F:zinc ion binding; IEA:InterPro. 
Interpro
 IPR000679; Znf_GATA.
 IPR013088; Znf_NHR/GATA. 
Pfam
 PF00320; GATA 
SMART
  
PROSITE
 PS00344; GATA_ZN_FINGER_1
 PS50114; GATA_ZN_FINGER_2 
PRINTS