CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-028565
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
  
Protein Name
 Coiled-coil alpha-helical rod protein 1 
Protein Synonyms/Alias
  
Gene Name
 CCHCR1 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
216TRRAGEAKELAEAQRubiquitination[1]
251TLVENLRKYVGEQVPubiquitination[1]
315QEEELTRKVQPSDSLubiquitination[1, 2]
360LEHSDSVKQLKGQVAubiquitination[1]
363SDSVKQLKGQVASLQubiquitination[1]
390LQRSLQDKAAEVEVEubiquitination[1, 3]
402EVERMGAKGLQLELSubiquitination[1]
627LQELERDKNLMLATLubiquitination[1, 3]
658VLPSLLDKKKSVVSSubiquitination[1]
660PSLLDKKKSVVSSPRubiquitination[1]
Reference
 [1] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961]
 [2] Integrated proteomic analysis of post-translational modifications by serial enrichment.
 Mertins P, Qiao JW, Patel J, Udeshi ND, Clauser KR, Mani DR, Burgess MW, Gillette MA, Jaffe JD, Carr SA.
 Nat Methods. 2013 Jul;10(7):634-7. [PMID: 23749302]
 [3] Systematic and quantitative assessment of the ubiquitin-modified proteome.
 Kim W, Bennett EJ, Huttlin EL, Guo A, Li J, Possemato A, Sowa ME, Rad R, Rush J, Comb MJ, Harper JW, Gygi SP.
 Mol Cell. 2011 Oct 21;44(2):325-40. [PMID: 21906983] 
Functional Description
  
Sequence Annotation
  
Keyword
 Complete proteome; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 729 AA 
Protein Sequence
MFPPSGSTGL IPPSHFQARP LSTLPRMAPT WLSDIPLVQP PGHQDVSERR LDTQRPQVTM 60
WERDVSSDRQ EPGRRGRSWG LEGSQALSQQ AEVIVRQLQE LRRLEEEVRL LRETSLQQKM 120
RLEAQAMELE ALARAEKAGR AEAEGLRAAL AGAEVVRKNL EEGSQRELEE VQRLHQEQLS 180
SLTQAHEEAL SSLTSKAEGL EKSLSSLETR RAGEAKELAE AQREAELLRK QLSKTQEDLE 240
AQVTLVENLR KYVGEQVPSE VHSQTWELER QKLLETMQHL QEDRDSLHAT AELLQVRVQS 300
LTHILALQEE ELTRKVQPSD SLEPEFTRKC QSLLNRWREK VFALMVQLKA QELEHSDSVK 360
QLKGQVASLQ EKVTSQSQEQ AILQRSLQDK AAEVEVERMG AKGLQLELSR AQEARRRWQQ 420
QTASAEEQLR LVVNAVSSCP LPPPVTDVSL ELQQLREERN RLDAELQLSA RLIQQEVGRA 480
REQGEAERQQ LSKVAQQLEQ ELQQTQESLA SLGLQLEVAR QGQQESTEEA ASLRQELTQQ 540
QELYGQALQE KVAEVETRLR EQLSDTERRL NEARREHAKA VVSLRQIQRR AAQEKERSQE 600
LRRLQEEARK EEGQRLARRL QELERDKNLM LATLQQEGLL SRYKQQRLLT VLPSLLDKKK 660
SVVSSPRPPE CSASAPVAAA VPTRESIKGS LSVLLDDLQD LSEAISKEEA VCQGDNLDRC 720
SSSNPQMSS 729 
Gene Ontology
 GO:0005737; C:cytoplasm; IEA:InterPro.
 GO:0005634; C:nucleus; IEA:InterPro.
 GO:0030154; P:cell differentiation; IEA:InterPro. 
Interpro
 IPR009800; HCR. 
Pfam
 PF07111; HCR 
SMART
  
PROSITE
  
PRINTS