| Tag | Content |
|---|
| CPLM ID | CPLM-026958 |
UniProt Accession | |
Genbank Protein ID | |
Genbank Nucleotide ID | |
Protein Name | RNA polymerase sigma-54 factor |
Protein Synonyms/Alias | |
Gene Name | rpoN |
Gene Synonyms/Alias | DVU_1628 |
Created Date | July 27, 2013 |
Organism | Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIM |
NCBI Taxa ID | 882 |
Lysine Modification | Position | Peptide | Type | References |
|---|
| 445 | ERIGEILKEQLQVNI | methylation | [1] |
|
Reference | [1] Post-translational modifications of Desulfovibrio vulgaris Hildenborough sulfate reduction pathway proteins. Gaucher SP, Redding AM, Mukhopadhyay A, Keasling JD, Singh AK. J Proteome Res. 2008 Jun;7(6):2320-31. [ PMID: 18416566] |
Functional Description | Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released (By similarity). |
Sequence Annotation | |
Keyword | Complete proteome; DNA-binding; DNA-directed RNA polymerase; Nucleotidyltransferase; Reference proteome; Sigma factor; Transcription; Transcription regulation; Transferase. |
Sequence Source | UniProt (SWISSPROT/TrEMBL); GenBank; EMBL |
Protein Length | 476 AA |
Protein Sequence | MALELRQQLK LSQQLVMTPQ LQQAIRLLQL SRLELVETVQ QELLENPFLE EGMDEGAASS 60
ASEASSRKDE SAPEAYDREL SRNADWEDYL GEFASSSRQA QVRETELPEE MTAFEARYSA 120
RPSLEGHLMW QLRLSRLTED QKGIGETIIG NIGSSGYLQA SVEDIAEMCG ADASEVIPVL 180
HAVQRFDPVG VASRTPQECL LIQIEMLGYD RDRVLVELVR DHLEDLETRR YKPLLRKFKL 240
DMDDLKEYLD IIQSLDPMPG SSFGGSDPMF VSPDVFVYKY DDEFVIVLND DGLPHLQLSS 300
LYDQSLAGVT GKDKDFVQEK VRSASWLIKS LYQRQRTLYK VVESIIKYQR GFFEDGVTRL 360
RPLILKDIAD DISMHESTVS RITTNKFVAT PHGVFELKFF FNSALELDDG SQVGSESVKA 420
LIKKLIGEEN PKEPLSDERI GEILKEQLQV NIARRTVAKY RTAMNIPSSS KRKEVF 476 |
Gene Ontology | GO:0003677; F:DNA binding; IEA:UniProtKB-KW. GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW. GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro. GO:0016987; F:sigma factor activity; IEA:UniProtKB-KW. GO:0006352; P:DNA-dependent transcription, initiation; IEA:InterPro. |
Interpro | |
Pfam | |
SMART | |
PROSITE | |
PRINTS | |