CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-001210
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Enoyl-CoA delta isomerase 2, mitochondrial 
Protein Synonyms/Alias
 DRS-1; Delta(3),delta(2)-enoyl-CoA isomerase; D3,D2-enoyl-CoA isomerase; Diazepam-binding inhibitor-related protein 1; DBI-related protein 1; Dodecenoyl-CoA isomerase; Hepatocellular carcinoma-associated antigen 88; Peroxisomal 3,2-trans-enoyl-CoA isomerase; pECI; Renal carcinoma antigen NY-REN-1 
Gene Name
 ECI2 
Gene Synonyms/Alias
 DRS1; HCA88; PECI 
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
51ENSMNQVKLLKKDPGacetylation[1]
90GVFDLINKAKWDAWNubiquitination[2, 3]
92FDLINKAKWDAWNALacetylation[1]
92FDLINKAKWDAWNALubiquitination[2, 3, 4]
104NALGSLPKEAARQNYacetylation[5]
349PNALRISKEVIRKREubiquitination[4]
Reference
 [1] Lysine acetylation targets protein complexes and co-regulates major cellular functions.
 Choudhary C, Kumar C, Gnad F, Nielsen ML, Rehman M, Walther TC, Olsen JV, Mann M.
 Science. 2009 Aug 14;325(5942):834-40. [PMID: 19608861]
 [2] A proteome-wide, quantitative survey of in vivo ubiquitylation sites reveals widespread regulatory roles.
 Wagner SA, Beli P, Weinert BT, Nielsen ML, Cox J, Mann M, Choudhary C.
 Mol Cell Proteomics. 2011 Oct;10(10):M111.013284. [PMID: 21890473]
 [3] hCKSAAP_UbSite: improved prediction of human ubiquitination sites by exploiting amino acid pattern and properties.
 Chen Z, Zhou Y, Song J, Zhang Z.
 Biochim Biophys Acta. 2013 Aug;1834(8):1461-7. [PMID: 23603789]
 [4] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961]
 [5] Regulation of cellular metabolism by protein lysine acetylation.
 Zhao S, Xu W, Jiang W, Yu W, Lin Y, Zhang T, Yao J, Zhou L, Zeng Y, Li H, Li Y, Shi J, An W, Hancock SM, He F, Qin L, Chin J, Yang P, Chen X, Lei Q, Xiong Y, Guan KL.
 Science. 2010 Feb 19;327(5968):1000-4. [PMID: 20167786
Functional Description
 Able to isomerize both 3-cis and 3-trans double bonds into the 2-trans form in a range of enoyl-CoA species. Has a preference for 3-trans substrates (By similarity). 
Sequence Annotation
 DOMAIN 39 124 ACB.
 REGION 66 70 Acyl-CoA binding (By similarity).
 REGION 151 322 ECH-like.
 MOTIF 392 394 Microbody targeting signal (Potential).
 BINDING 92 92 Acyl-CoA (By similarity).
 BINDING 111 111 Acyl-CoA (By similarity).
 MOD_RES 51 51 N6-acetyllysine.
 MOD_RES 62 62 N6-acetyllysine (By similarity).
 MOD_RES 92 92 N6-acetyllysine.  
Keyword
 3D-structure; Acetylation; Alternative splicing; Complete proteome; Isomerase; Mitochondrion; Peroxisome; Polymorphism; Reference proteome; Transit peptide. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 394 AA 
Protein Sequence
MAMAYLAWRL ARRSCPSSLQ VTSFPVVQLH MNRTAMRASQ KDFENSMNQV KLLKKDPGNE 60
VKLKLYALYK QATEGPCNMP KPGVFDLINK AKWDAWNALG SLPKEAARQN YVDLVSSLSP 120
SLESSSQVEP GTDRKSTGFE TLVVTSEDGI TKIMFNRPKK KNAINTEMYH EIMRALKAAS 180
KDDSIITVLT GNGDYYSSGN DLTNFTDIPP GGVEEKAKNN AVLLREFVGC FIDFPKPLIA 240
VVNGPAVGIS VTLLGLFDAV YASDRATFHT PFSHLGQSPE GCSSYTFPKI MSPAKATEML 300
IFGKKLTAGE ACAQGLVTEV FPDSTFQKEV WTRLKAFAKL PPNALRISKE VIRKREREKL 360
HAVNAEECNV LQGRWLSDEC TNAVVNFLSR KSKL 394 
Gene Ontology
 GO:0005739; C:mitochondrion; IDA:LIFEdb.
 GO:0005782; C:peroxisomal matrix; IDA:UniProtKB.
 GO:0004165; F:dodecenoyl-CoA delta-isomerase activity; IDA:UniProtKB.
 GO:0000062; F:fatty-acyl-CoA binding; IEA:InterPro.
 GO:0009062; P:fatty acid catabolic process; IDA:UniProtKB. 
Interpro
 IPR022408; Acyl-CoA-binding_prot_CS.
 IPR000582; Acyl-CoA-binding_protein.
 IPR001753; Crotonase_core_superfam.
 IPR014352; FERM/acyl-CoA-bd_prot_3-hlx. 
Pfam
 PF00887; ACBP
 PF00378; ECH 
SMART
  
PROSITE
 PS00880; ACB_1
 PS51228; ACB_2 
PRINTS
 PR00689; ACOABINDINGP.