CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-026930
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 cDNA FLJ45706 fis, clone FEBRA2028457, highly similar to Nucleolin 
Protein Synonyms/Alias
  
Gene Name
  
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
217NKSAPELKTGISDVFubiquitination[1]
226GISDVFAKNDLAVVDubiquitination[1, 2]
241VRIGMTRKFGYVDFEubiquitination[1]
263ALELTGLKVFGNEIKubiquitination[1]
296LAKNLPYKVTQDELKubiquitination[1]
303KVTQDELKEVFEDAAubiquitination[1]
360SLYYTGEKGQNQDYRubiquitination[1]
370NQDYRGGKNSTWSGEubiquitination[1]
406FEKATFIKVPQNQNGubiquitination[1]
438EALNSCNKREIEGRAubiquitination[1]
465NARSQPSKTLFVKGLubiquitination[1]
470PSKTLFVKGLSEDTTubiquitination[1]
482DTTEETLKESFDGSVubiquitination[1]
503DRETGSSKGFGFVDFubiquitination[1]
Reference
 [1] Systematic and quantitative assessment of the ubiquitin-modified proteome.
 Kim W, Bennett EJ, Huttlin EL, Guo A, Li J, Possemato A, Sowa ME, Rad R, Rush J, Comb MJ, Harper JW, Gygi SP.
 Mol Cell. 2011 Oct 21;44(2):325-40. [PMID: 21906983]
 [2] Proteome-wide identification of ubiquitylation sites by conjugation of engineered lysine-less ubiquitin.
 Oshikawa K, Matsumoto M, Oyamada K, Nakayama KI.
 J Proteome Res. 2012 Feb 3;11(2):796-807. [PMID: 22053931] 
Functional Description
  
Sequence Annotation
  
Keyword
  
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 603 AA 
Protein Sequence
MVKLAKAGKN QGDPKKMAPP PKEVEEDSED EEMSEDEEDD EDDDDDEEDD SEEEAMETTP 60
AKGKKAAKVV PVKAKGAKNG KNAKKEDSDE EEDDDSEEDE EDDEDEDEDE DEIEPAAMKA 120
AAAAPASEDE DDEDDEDDED DDDDEDDEDD DEDDEEEEEE EEEEPVKEAP GKRKKEMAKQ 180
KAAPEAKKQK VEGTEPTTAF NLFVGNLNFN KSAPELKTGI SDVFAKNDLA VVDVRIGMTR 240
KFGYVDFESA EDLEKALELT GLKVFGNEIK LEKPKGKDSK KERDARTLLA KNLPYKVTQD 300
ELKEVFEDAA EIRLVSKDGN SKGIAYIEFK TEADAEKTFE EKQGTEIDGR SISLYYTGEK 360
GQNQDYRGGK NSTWSGESKT LVLSNLSYSA TEETLQEVFE KATFIKVPQN QNGKSKGYAF 420
IEFASFEDAK EALNSCNKRE IEGRAIRLEL QGPRGSPNAR SQPSKTLFVK GLSEDTTEET 480
LKESFDGSVR ARIVTDRETG SSKGFGFVDF NSEEDAKAAK EAMEDGEIDG NKVTLDWAKP 540
KGEGGFGGRG GGRGGFGGRG GGRGGRGGFG GRGRGGFGGR GGFRGGRGGG GDHKPQGKKT 600
KFE 603 
Gene Ontology
 GO:0003676; F:nucleic acid binding; IEA:InterPro.
 GO:0000166; F:nucleotide binding; IEA:InterPro. 
Interpro
 IPR012677; Nucleotide-bd_a/b_plait.
 IPR000504; RRM_dom. 
Pfam
 PF00076; RRM_1 
SMART
 SM00360; RRM 
PROSITE
 PS50102; RRM 
PRINTS