CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-043906
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
  
Protein Name
 Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3 
Protein Synonyms/Alias
  
Gene Name
 PLOD3 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
70DPDMAFCKSFRDKGIubiquitination[1, 2]
75FCKSFRDKGIFLHLSubiquitination[2]
208LNVALNHKGLDYEGGubiquitination[1]
Reference
 [1] Global identification of modular cullin-RING ligase substrates.
 Emanuele MJ, Elia AE, Xu Q, Thoma CR, Izhar L, Leng Y, Guo A, Chen YN, Rush J, Hsu PW, Yen HC, Elledge SJ.
 Cell. 2011 Oct 14;147(2):459-74. [PMID: 21963094]
 [2] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961
Functional Description
  
Sequence Annotation
  
Keyword
 Complete proteome; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 264 AA 
Protein Sequence
XNFWGALSPD EYYARSEDYV ELVQRKRVGV WNVPYISQAY VIRGDTLRME LPQRDVFSGS 60
DTDPDMAFCK SFRDKGIFLH LSNQHEFGRL LATSRYDTEH LHPDLWQIFD NPVDWKEQYI 120
HENYSRALEG EGIVEQPCPD VYWFPLLSEQ MCDELVAEME HYGQWSGGRH EARAVMNFVV 180
RYRPDEQPSL RPHHDSSTFT LNVALNHKGL DYEGGGCRFL RYDCVISSPR KGWALLHPGR 240
LTHYHEGLPT TWGTRYIMVS FVDP 264 
Gene Ontology
 GO:0005783; C:endoplasmic reticulum; IEA:InterPro.
 GO:0005506; F:iron ion binding; IEA:InterPro.
 GO:0031418; F:L-ascorbic acid binding; IEA:InterPro.
 GO:0008475; F:procollagen-lysine 5-dioxygenase activity; IEA:InterPro. 
Interpro
 IPR005123; Oxoglu/Fe-dep_dioxygenase.
 IPR006620; Pro_4_hyd_alph.
 IPR001006; Procol_lys_dOase. 
Pfam
 PF03171; 2OG-FeII_Oxy 
SMART
 SM00702; P4Hc 
PROSITE
 PS51471; FE2OG_OXY
 PS01325; LYS_HYDROXYLASE 
PRINTS