CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-015348
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 H/ACA ribonucleoprotein complex subunit 3 
Protein Synonyms/Alias
 Nucleolar protein 10; Nucleolar protein family A member 3; snoRNP protein NOP10 
Gene Name
 NOP10 
Gene Synonyms/Alias
 YHR072W-A 
Created Date
 July 27, 2013 
Organism
 Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) 
NCBI Taxa ID
 559292 
Lysine Modification
Position
Peptide
Type
References
28TESGEITKSAHPARFubiquitination[1, 2]
40ARFSPDDKYSRQRVTacetylation[3]
Reference
 [1] Sites of ubiquitin attachment in Saccharomyces cerevisiae.
 Starita LM, Lo RS, Eng JK, von Haller PD, Fields S.
 Proteomics. 2012 Jan;12(2):236-40. [PMID: 22106047]
 [2] Global analysis of phosphorylation and ubiquitylation cross-talk in protein degradation.
 Swaney DL, Beltrao P, Starita L, Guo A, Rush J, Fields S, Krogan NJ, VillĂ©n J.
 Nat Methods. 2013 Jul;10(7):676-82. [PMID: 23749301]
 [3] Proteome-wide analysis of lysine acetylation suggests its broad regulatory scope in Saccharomyces cerevisiae.
 Henriksen P, Wagner SA, Weinert BT, Sharma S, Bacinskaja G, Rehman M, Juffer AH, Walther TC, Lisby M, Choudhary C.
 Mol Cell Proteomics. 2012 Nov;11(11):1510-22. [PMID: 22865919
Functional Description
 Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs. Essential for growth. 
Sequence Annotation
 MOD_RES 36 36 Phosphoserine.  
Keyword
 3D-structure; Complete proteome; Direct protein sequencing; Nucleus; Phosphoprotein; Reference proteome; Ribonucleoprotein; Ribosome biogenesis; rRNA processing. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 58 AA 
Protein Sequence
MHLMYTLGPD GKRIYTLKKV TESGEITKSA HPARFSPDDK YSRQRVTLKK RFGLVPGQ 58 
Gene Ontology
 GO:0031429; C:box H/ACA snoRNP complex; IPI:SGD.
 GO:0003723; F:RNA binding; IDA:SGD.
 GO:0000469; P:cleavage involved in rRNA processing; IMP:SGD.
 GO:0031118; P:rRNA pseudouridine synthesis; IMP:SGD.
 GO:0031120; P:snRNA pseudouridine synthesis; IDA:SGD. 
Interpro
 IPR007264; H/ACA_rnp_Nop10. 
Pfam
 PF04135; Nop10p 
SMART
  
PROSITE
  
PRINTS