CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-017632
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 E3 ubiquitin-protein ligase ZNRF1 
Protein Synonyms/Alias
 Nerve injury-induced gene 283 protein; Zinc/RING finger protein 1 
Gene Name
 ZNRF1 
Gene Synonyms/Alias
 NIN283 
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
144FSSHSGFKCPICSKSubiquitination[1]
150FKCPICSKSVASDEMubiquitination[1]
167HFIMCLSKPRLSYNGubiquitination[1]
Reference
 [1] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961
Functional Description
 E3 ubiquitin-protein ligase that mediates the ubiquitination of AKT1 and GLUL, thereby playing a role in neuron cells differentiation. Plays a role in the establishment and maintenance of neuronal transmission and plasticity. Regulates Schwann cells differentiation by mediating ubiquitination of GLUL. Promotes neurodegeneration by mediating 'Lys-48'-linked polyubiquitination and subsequent degradation of AKT1 in axons: degradation of AKT1 prevents AKT1-mediated phosphorylation of GSK3B, leading to GSK3B activation and phosphorylation of DPYSL2/CRMP2 followed by destabilization of microtubule assembly in axons (Probable). 
Sequence Annotation
 ZN_FING 184 225 RING-type; atypical.
 REGION 2 10 Required for endosomal and lysosomal
 MOD_RES 52 52 Phosphoserine.
 MOD_RES 53 53 Phosphoserine.
 MOD_RES 123 123 Phosphoserine (By similarity).
 LIPID 2 2 N-myristoyl glycine (Probable).  
Keyword
 Alternative splicing; Cell junction; Complete proteome; Cytoplasmic vesicle; Endosome; Ligase; Lipoprotein; Lysosome; Membrane; Metal-binding; Myristate; Phosphoprotein; Reference proteome; Synapse; Ubl conjugation pathway; Zinc; Zinc-finger. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 227 AA 
Protein Sequence
MGGKQSTAAR SRGPFPGVST DDSAVPPPGG APHFGHYRTG GGAMGLRSRS VSSVAGMGMD 60
PSTAGGVPFG LYTPASRGTG DSERAPGGGG SASDSTYAHG NGYQETGGGH HRDGMLYLGS 120
RASLADALPL HIAPRWFSSH SGFKCPICSK SVASDEMEMH FIMCLSKPRL SYNGRIQRSL 180
RGAQPEKTWL SGRTLQEQPW RTECSWAPMA QMQSYPHCPV ENREDDVLTK DAGECVICLE 240
ELLQGDTIAR LPCLCIYHKS CIDSWFEVNR SCPEHPAD 278 
Gene Ontology
 GO:0030054; C:cell junction; IEA:UniProtKB-KW.
 GO:0005768; C:endosome; IDA:LIFEdb.
 GO:0005764; C:lysosome; IEA:UniProtKB-SubCell.
 GO:0030672; C:synaptic vesicle membrane; IEA:UniProtKB-SubCell.
 GO:0004842; F:ubiquitin-protein ligase activity; ISS:UniProtKB.
 GO:0008270; F:zinc ion binding; IEA:InterPro.
 GO:0043161; P:proteasomal ubiquitin-dependent protein catabolic process; ISS:UniProtKB.
 GO:0070936; P:protein K48-linked ubiquitination; ISS:UniProtKB. 
Interpro
 IPR001841; Znf_RING.
 IPR013083; Znf_RING/FYVE/PHD. 
Pfam
 PF13639; zf-RING_2 
SMART
 SM00184; RING 
PROSITE
 PS00518; ZF_RING_1
 PS50089; ZF_RING_2 
PRINTS