CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-009099
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Poly(rC)-binding protein 4 
Protein Synonyms/Alias
 Alpha-CP4 
Gene Name
 Pcbp4 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Mus musculus (Mouse) 
NCBI Taxa ID
 10090 
Lysine Modification
Position
Peptide
Type
References
119QCGSLIGKAGTKIKEubiquitination[1]
Reference
 [1] Proteomic analyses reveal divergent ubiquitylation site patterns in murine tissues.
 Wagner SA, Beli P, Weinert BT, Schölz C, Kelstrup CD, Young C, Nielsen ML, Olsen JV, Brakebusch C, Choudhary C.
 Mol Cell Proteomics. 2012 Dec;11(12):1578-85. [PMID: 22790023] 
Functional Description
 Single-stranded nucleic acid binding protein that binds preferentially to oligo dC (By similarity). 
Sequence Annotation
 DOMAIN 17 67 KH 1.
 DOMAIN 101 154 KH 2.
 DOMAIN 241 293 KH 3.  
Keyword
 Complete proteome; Cytoplasm; DNA-binding; Reference proteome; Repeat; Ribonucleoprotein; RNA-binding. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 403 AA 
Protein Sequence
MSSSDAGLEE GPELSITLTL RMLMHGKEVG SIIGKKGETV KRIREQSSAR ITISEGSCPE 60
RITTITGSTA AVFHAVSMIA FKLDEDLCAA PANGGSVSRP PVTLRLVIPA SQCGSLIGKA 120
GTKIKEIRET TGAQVQVAGD LLPNSTERAV TVSGVPDAII LCVRQICAVI LESPPKGATI 180
PYHPSLSLGT VLLSANQGFS VQGQYGAVTP AEVTKLQQLS GHAVPFASPS VVPGMDPSTQ 240
TSSQEFLVPN DLIGCVIGRQ GSKISEIRQM SGAHIKIGNQ AEGAGERHVT ITGSPVSIAL 300
AQYLITACLE TAKSTSGGTP GSAPADLPTP FSPPLTALPT APPGLLGTPY AISLSNFIGL 360
KPVPFLALPP ASPGPPPGLA AYTAKMAAAN GSKKAERQKF SPY 403 
Gene Ontology
 GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
 GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW.
 GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
 GO:0003723; F:RNA binding; IEA:UniProtKB-KW. 
Interpro
 IPR004087; KH_dom.
 IPR004088; KH_dom_type_1. 
Pfam
 PF00013; KH_1 
SMART
 SM00322; KH 
PROSITE
 PS50084; KH_TYPE_1 
PRINTS