CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-012951
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Bifunctional ATP-dependent dihydroxyacetone kinase/FAD-AMP lyase (cyclizing) 
Protein Synonyms/Alias
 ATP-dependent dihydroxyacetone kinase; DHA kinase; Glycerone kinase; Triokinase; Triose kinase; FAD-AMP lyase (cyclizing); FAD-AMP lyase (cyclic FMN forming); FMN cyclase 
Gene Name
 DAK 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
46RSDLDSLKGRVALLSubiquitination[1]
372AAGGSASKRMALVLEubiquitination[1, 2, 3]
420RAIQEWLKEGPPPASubiquitination[1]
465AAQPLKAKTSLPAWSubiquitination[1]
484AGLEAMQKYGKAAPGubiquitination[1]
522DLLQVLTKAVKSAEAubiquitination[1, 2, 4]
Reference
 [1] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961]
 [2] Systematic and quantitative assessment of the ubiquitin-modified proteome.
 Kim W, Bennett EJ, Huttlin EL, Guo A, Li J, Possemato A, Sowa ME, Rad R, Rush J, Comb MJ, Harper JW, Gygi SP.
 Mol Cell. 2011 Oct 21;44(2):325-40. [PMID: 21906983]
 [3] Methods for quantification of in vivo changes in protein ubiquitination following proteasome and deubiquitinase inhibition.
 Udeshi ND, Mani DR, Eisenhaure T, Mertins P, Jaffe JD, Clauser KR, Hacohen N, Carr SA.
 Mol Cell Proteomics. 2012 May;11(5):148-59. [PMID: 22505724]
 [4] A proteome-wide, quantitative survey of in vivo ubiquitylation sites reveals widespread regulatory roles.
 Wagner SA, Beli P, Weinert BT, Nielsen ML, Cox J, Mann M, Choudhary C.
 Mol Cell Proteomics. 2011 Oct;10(10):M111.013284. [PMID: 21890473
Functional Description
 Catalyzes both the phosphorylation of dihydroxyacetone and of glyceraldehyde, and the splitting of ribonucleoside diphosphate-X compounds among which FAD is the best substrate. 
Sequence Annotation
 DOMAIN 9 336 DhaK.
 DOMAIN 372 571 DhaL.
 NP_BIND 401 404 ATP (By similarity).
 NP_BIND 446 447 ATP (By similarity).
 NP_BIND 494 495 ATP (By similarity).
 NP_BIND 556 558 ATP (By similarity).
 REGION 56 59 Dihydroxyacetone binding (By similarity).
 ACT_SITE 221 221 Tele-hemiaminal-histidine intermediate
 BINDING 109 109 Dihydroxyacetone (By similarity).
 BINDING 114 114 Dihydroxyacetone (By similarity).
 BINDING 486 486 ATP; via carbonyl oxygen (By similarity).  
Keyword
 ATP-binding; Cobalt; Complete proteome; FAD; Kinase; Lyase; Magnesium; Manganese; Metal-binding; Multifunctional enzyme; Nucleotide-binding; Polymorphism; Reference proteome; Transferase. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 575 AA 
Protein Sequence
MTSKKLVNSV AGCADDALAG LVACNPNLQL LQGHRVALRS DLDSLKGRVA LLSGGGSGHE 60
PAHAGFIGKG MLTGVIAGAV FTSPAVGSIL AAIRAVAQAG TVGTLLIVKN YTGDRLNFGL 120
AREQARAEGI PVEMVVIGDD SAFTVLKKAG RRGLCGTVLI HKVAGALAEA GVGLEEIAKQ 180
VNVVAKAMGT LGVSLSSCSV PGSKPTFELS ADEVELGLGI HGEAGVRRIK MATADEIVKL 240
MLDHMTNTTN ASHVPVQPGS SVVMMVNNLG GLSFLELGII ADATVRSLEG RGVKIARALV 300
GTFMSALEMP GISLTLLLVD EPLLKLIDAE TTAAAWPNVA AVSITGRKRS RVAPAEPQEA 360
PDSTAAGGSA SKRMALVLER VCSTLLGLEE HLNALDRAAG DGDCGTTHSR AARAIQEWLK 420
EGPPPASPAQ LLSKLSVLLL EKMGGSSGAL YGLFLTAAAQ PLKAKTSLPA WSAAMDAGLE 480
AMQKYGKAAP GDRTMLDSLW AAGQELQAWK SPGADLLQVL TKAVKSAEAA AEATKNMEAG 540
AGRASYISSA RLEQPDPGAV AAAAILRAIL EVLQS 575 
Gene Ontology
 GO:0005829; C:cytosol; TAS:Reactome.
 GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
 GO:0034012; F:FAD-AMP lyase (cyclizing) activity; IEA:EC.
 GO:0004371; F:glycerone kinase activity; IEA:EC.
 GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
 GO:0050354; F:triokinase activity; IEA:EC.
 GO:0006071; P:glycerol metabolic process; IEA:InterPro.
 GO:0045087; P:innate immune response; TAS:Reactome. 
Interpro
 IPR004006; Dak1.
 IPR004007; Dak2.
 IPR012734; DhaK_ATP. 
Pfam
 PF02733; Dak1
 PF02734; Dak2 
SMART
  
PROSITE
 PS51481; DHAK
 PS51480; DHAL 
PRINTS