CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-001003
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Heterogeneous nuclear ribonucleoprotein C-like 1 
Protein Synonyms/Alias
 hnRNP C-like-1; hnRNP core protein C-like 1 
Gene Name
 HNRNPCL1 
Gene Synonyms/Alias
 HNRPCL1 
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
29NLNTLVVKKSDVEAIubiquitination[1]
39DVEAIFSKYGKIAGCacetylation[2]
39DVEAIFSKYGKIAGCubiquitination[1]
157GNTSRRGKSGFNSKSacetylation[2]
193ELTQIKQKVDSLLENubiquitination[1]
203SLLENLEKIEKEQSKacetylation[2]
203SLLENLEKIEKEQSKubiquitination[1]
237KKDETHVKMESEGGAsumoylation[3]
Reference
 [1] Systematic and quantitative assessment of the ubiquitin-modified proteome.
 Kim W, Bennett EJ, Huttlin EL, Guo A, Li J, Possemato A, Sowa ME, Rad R, Rush J, Comb MJ, Harper JW, Gygi SP.
 Mol Cell. 2011 Oct 21;44(2):325-40. [PMID: 21906983]
 [2] Lysine acetylation targets protein complexes and co-regulates major cellular functions.
 Choudhary C, Kumar C, Gnad F, Nielsen ML, Rehman M, Walther TC, Olsen JV, Mann M.
 Science. 2009 Aug 14;325(5942):834-40. [PMID: 19608861]
 [3] SUMO modification of heterogeneous nuclear ribonucleoproteins.
 Vassileva MT, Matunis MJ.
 Mol Cell Biol. 2004 May;24(9):3623-32. [PMID: 15082759
Functional Description
 May play a role in nucleosome assembly by neutralizing basic proteins such as A and B core hnRNPs (By similarity). 
Sequence Annotation
 DOMAIN 16 87 RRM.  
Keyword
 Complete proteome; Nucleus; Polymorphism; Reference proteome; Ribonucleoprotein; RNA-binding. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 293 AA 
Protein Sequence
MASNVTNKMD PHSMNSRVFI GNLNTLVVKK SDVEAIFSKY GKIAGCSVHK GFAFVQYDKE 60
KNARAAVAGE DGRMIASQVV DINLAAEPKV NRGNAGVKRS AAEMYGSSFD LDYGFQRDYY 120
DGMYSFPARV PPPPPIALAV VPSKRQRLSG NTSRRGKSGF NSKSGKRGSS KSGKLKGDDL 180
QAIKQELTQI KQKVDSLLEN LEKIEKEQSK QEVEVKNAKS EEEQSSSSMK KDETHVKMES 240
EGGAEDSAEE GDPLDDDVNE DQGDDQLELI KDDEKEAEEG EDDRDSTNGQ DDS 293 
Gene Ontology
 GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
 GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW.
 GO:0000166; F:nucleotide binding; IEA:InterPro.
 GO:0003723; F:RNA binding; IEA:UniProtKB-KW. 
Interpro
 IPR017347; hnRNP_C_Raly.
 IPR012677; Nucleotide-bd_a/b_plait.
 IPR000504; RRM_dom. 
Pfam
 PF00076; RRM_1 
SMART
 SM00360; RRM 
PROSITE
 PS50102; RRM 
PRINTS