CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-005625
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Lipopolysaccharide biosynthesis protein RffA 
Protein Synonyms/Alias
  
Gene Name
 rffA 
Gene Synonyms/Alias
 wecE; yifI; b3791; JW3765 
Created Date
 July 27, 2013 
Organism
 Escherichia coli (strain K12) 
NCBI Taxa ID
 83333 
Lysine Modification
Position
Peptide
Type
References
197GATLINDKALIERAEacetylation[1]
223FFRGQVDKYTWRDIGacetylation[1]
Reference
 [1] Acetyl-Phosphate Is a Critical Determinant of Lysine Acetylation in E. coli.
 Weinert BT, Iesmantavicius V, Wagner SA, Schölz C, Gummesson B, Beli P, Nyström T, Choudhary C.
 Mol Cell. 2013 Jul 25;51(2):265-72. [PMID: 23830618
Functional Description
 Involved in ECA elongation. 
Sequence Annotation
 MOD_RES 181 181 N6-(pyridoxal phosphate)lysine (By  
Keyword
 Complete proteome; Lipopolysaccharide biosynthesis; Pyridoxal phosphate; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 376 AA 
Protein Sequence
MIPFNAPPVV GTELDYMQSA MGSGKLCGDG GFTRRCQQWL EQRFGSAKVL LTPSCTASLE 60
MAALLLDIQP GDEVIMPSYT FVSTANAFVL RGAKIVFVDV RPDTMNIDET LIEAAITDKT 120
RVIVPVHYAG VACEMDTIMA LAKKHNLFVV EDAAQGVMST YKGRALGTIG HIGCFSFHET 180
KNYTAGGEGG ATLINDKALI ERAEIIREKG TNRSQFFRGQ VDKYTWRDIG SSYLMSDLQA 240
AYLWAQLEAA DRINQQRLAL WQNYYDALAP LAKAGRIELP SIPDGCVQNA HMFYIKLRDI 300
DDRSALINFL KEAEIMAVFH YIPLHGCPAG EHFGEFHGED RYTTKESERL LRLPLFYNLS 360
PVNQRTVIAT LLNYFS 376 
Gene Ontology
 GO:0019180; F:dTDP-4-amino-4,6-dideoxygalactose transaminase activity; IDA:EcoCyc.
 GO:0030170; F:pyridoxal phosphate binding; IEA:InterPro.
 GO:0009246; P:enterobacterial common antigen biosynthetic process; IMP:EcoCyc.
 GO:0009243; P:O antigen biosynthetic process; IEA:UniProtKB-UniPathway. 
Interpro
 IPR000653; DegT/StrS_aminotransferase.
 IPR012749; ECA_WecE.
 IPR015424; PyrdxlP-dep_Trfase.
 IPR015421; PyrdxlP-dep_Trfase_major_sub1.
 IPR015422; PyrdxlP-dep_Trfase_major_sub2. 
Pfam
 PF01041; DegT_DnrJ_EryC1 
SMART
  
PROSITE
  
PRINTS