CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-003028
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 30S ribosomal protein S13 
Protein Synonyms/Alias
  
Gene Name
 rpsM 
Gene Synonyms/Alias
 b3298; JW3260 
Created Date
 July 27, 2013 
Organism
 Escherichia coli (strain K12) 
NCBI Taxa ID
 83333 
Lysine Modification
Position
Peptide
Type
References
13GINIPDHKHAVIALTacetylation[1]
27TSIYGVGKTRSKAILacetylation[1]
62TLRDEVAKFVVEGDLacetylation[1]
78REISMSIKRLMDLGCacetylation[1]
Reference
 [1] Acetyl-Phosphate Is a Critical Determinant of Lysine Acetylation in E. coli.
 Weinert BT, Iesmantavicius V, Wagner SA, Schölz C, Gummesson B, Beli P, Nyström T, Choudhary C.
 Mol Cell. 2013 Jul 25;51(2):265-72. [PMID: 23830618
Functional Description
 Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. 
Sequence Annotation
  
Keyword
 3D-structure; Complete proteome; Direct protein sequencing; Reference proteome; Ribonucleoprotein; Ribosomal protein; RNA-binding; rRNA-binding; tRNA-binding. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 118 AA 
Protein Sequence
MARIAGINIP DHKHAVIALT SIYGVGKTRS KAILAAAGIA EDVKISELSE GQIDTLRDEV 60
AKFVVEGDLR REISMSIKRL MDLGCYRGLR HRRGLPVRGQ RTKTNARTRK GPRKPIKK 118 
Gene Ontology
 GO:0022627; C:cytosolic small ribosomal subunit; IDA:EcoliWiki.
 GO:0019843; F:rRNA binding; IEA:HAMAP.
 GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
 GO:0000049; F:tRNA binding; IEA:HAMAP.
 GO:0042254; P:ribosome biogenesis; IBA:RefGenome.
 GO:0006412; P:translation; IEA:HAMAP. 
Interpro
 IPR027437; 30s_Rbsml_prot_S13_C.
 IPR001892; Ribosomal_S13.
 IPR010979; Ribosomal_S13-like_H2TH.
 IPR019980; Ribosomal_S13_bac-type.
 IPR018269; Ribosomal_S13_CS. 
Pfam
 PF00416; Ribosomal_S13 
SMART
  
PROSITE
 PS00646; RIBOSOMAL_S13_1
 PS50159; RIBOSOMAL_S13_2 
PRINTS