CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-016835
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Ras-related protein Rab-43 
Protein Synonyms/Alias
  
Gene Name
 Rab43 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Mus musculus (Mouse) 
NCBI Taxa ID
 10090 
Lysine Modification
Position
Peptide
Type
References
130VQLLIGNKSDLADFRubiquitination[1]
Reference
 [1] Proteomic analyses reveal divergent ubiquitylation site patterns in murine tissues.
 Wagner SA, Beli P, Weinert BT, Schölz C, Kelstrup CD, Young C, Nielsen ML, Olsen JV, Brakebusch C, Choudhary C.
 Mol Cell Proteomics. 2012 Dec;11(12):1578-85. [PMID: 22790023
Functional Description
 The small GTPases Rab are key regulators of intracellular membrane trafficking, from the formation of transport vesicles to their fusion with membranes. Rabs cycle between an inactive GDP-bound form and an active GTP-bound form that is able to recruit to membranes different set of downstream effectors directly responsible for vesicle formation, movement, tethering and fusion. The low intrinsic GTPase activity of RAB43 is activated by USP6NL. Involved in retrograde transport from the endocytic pathway to the Golgi apparatus. Involved in the transport of Shiga toxin from early and recycling endosomes to the trans-Golgi network. Required for the structural integrity of the Golgi complex. Plays a role in the maturation of phagosomes that engulf pathogens, such as S.aureus and Mycobacterium. 
Sequence Annotation
 NP_BIND 23 30 GTP (By similarity).
 NP_BIND 71 75 GTP (By similarity).
 NP_BIND 129 132 GTP (By similarity).
 NP_BIND 161 162 GTP (By similarity).
 MOTIF 45 53 Effector region (By similarity).
 MOD_RES 80 80 Phosphothreonine.
 MOD_RES 210 210 Cysteine methyl ester (By similarity).
 LIPID 208 208 S-geranylgeranyl cysteine (By
 LIPID 210 210 S-geranylgeranyl cysteine (By  
Keyword
 Complete proteome; Cytoplasmic vesicle; Golgi apparatus; GTP-binding; Lipoprotein; Membrane; Methylation; Nucleotide-binding; Phosphoprotein; Prenylation; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 210 AA 
Protein Sequence
MAGPGPGDQD EHYDFLFKLV LVGDASVGKT CVVQRFKTGA FSARQGSTIG VDFTMKTLEI 60
QGKRVKLQIW DTAGQERFRT ITQSYYRSAN GAILAYDISK RSTFLSVPHW IEDVRKYAGS 120
NIVQLLIGNK SDLADFREVP LAEAQSLAEH YDILCAIETS AKDSSNVEEA FTRVATELIM 180
RHGGPMFSEK NTDHIQLDSK DIAESWGCGC 210 
Gene Ontology
 GO:0005794; C:Golgi apparatus; ISS:UniProtKB.
 GO:0045335; C:phagocytic vesicle; ISS:UniProtKB.
 GO:0030670; C:phagocytic vesicle membrane; IEA:UniProtKB-SubCell.
 GO:0005525; F:GTP binding; IEA:UniProtKB-KW.
 GO:0003924; F:GTPase activity; ISS:UniProtKB.
 GO:0007030; P:Golgi organization; ISS:UniProtKB.
 GO:0090382; P:phagosome maturation; ISS:UniProtKB.
 GO:0015031; P:protein transport; IEA:InterPro.
 GO:0035526; P:retrograde transport, plasma membrane to Golgi; ISS:UniProtKB.
 GO:0007264; P:small GTPase mediated signal transduction; IEA:InterPro. 
Interpro
 IPR027417; P-loop_NTPase.
 IPR005225; Small_GTP-bd_dom.
 IPR001806; Small_GTPase.
 IPR003579; Small_GTPase_Rab_type. 
Pfam
 PF00071; Ras 
SMART
 SM00175; RAB 
PROSITE
 PS51419; RAB 
PRINTS
 PR00449; RASTRNSFRMNG.