CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-031218
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 PCNA-interacting partner 
Protein Synonyms/Alias
 cDNA FLJ57586 
Gene Name
 PARPBP 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
7*MAVFNQKSVSDMIKubiquitination[1, 2]
14KSVSDMIKEFRKNWRubiquitination[2]
96REAFTDLKHAAREKQubiquitination[2]
122RTIELGGKGYAPPPSubiquitination[3]
Reference
 [1] Methods for quantification of in vivo changes in protein ubiquitination following proteasome and deubiquitinase inhibition.
 Udeshi ND, Mani DR, Eisenhaure T, Mertins P, Jaffe JD, Clauser KR, Hacohen N, Carr SA.
 Mol Cell Proteomics. 2012 May;11(5):148-59. [PMID: 22505724]
 [2] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961]
 [3] Systematic and quantitative assessment of the ubiquitin-modified proteome.
 Kim W, Bennett EJ, Huttlin EL, Guo A, Li J, Possemato A, Sowa ME, Rad R, Rush J, Comb MJ, Harper JW, Gygi SP.
 Mol Cell. 2011 Oct 21;44(2):325-40. [PMID: 21906983
Functional Description
  
Sequence Annotation
  
Keyword
 Complete proteome; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 183 AA 
Protein Sequence
MAVFNQKSVS DMIKEFRKNW RALCNSERTT LCGADSMLLA LQLSMAENNK QVQLLARKII 60
FSYLNLLVNS KNDLAVAYIL NIPDRGLGRE AFTDLKHAAR EKQMSIFLVA TSFIRTIELG 120
GKGYAPPPSD PLRTHVKGLS NFINFIDKLD EILGEIPNPR GCKSICWKIN NWNEFWKCSS 180
GQK 183 
Gene Ontology
  
Interpro
 IPR027417; P-loop_NTPase. 
Pfam
  
SMART
  
PROSITE
  
PRINTS