CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-041509
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Heterogeneous nuclear ribonucleoprotein D, isoform CRA_c 
Protein Synonyms/Alias
 Heterogeneous nuclear ribonucleoprotein D0 
Gene Name
 Hnrpd 
Gene Synonyms/Alias
 rCG_37950 
Created Date
 July 27, 2013 
Organism
 Rattus norvegicus (Rat) 
NCBI Taxa ID
 10116 
Lysine Modification
Position
Peptide
Type
References
70GAKIDASKNEEDEGKacetylation[1]
Reference
 [1] Proteomic analysis of lysine acetylation sites in rat tissues reveals organ specificity and subcellular patterns.
 Lundby A, Lage K, Weinert BT, Bekker-Jensen DB, Secher A, Skovgaard T, Kelstrup CD, Dmytriyev A, Choudhary C, Lundby C, Olsen JV.
 Cell Rep. 2012 Aug 30;2(2):419-31. [PMID: 22902405] 
Functional Description
  
Sequence Annotation
  
Keyword
 Complete proteome; Reference proteome; Ribonucleoprotein; Viral nucleoprotein; Virion. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 334 AA 
Protein Sequence
MSEEQFGGDG AAAAATAAVG GSAGEQEGAM VAAAQGAAAA AGSGSGGGSA PGGTEGGSTE 60
AEGAKIDASK NEEDEGKMFI GGLSWDTTKK DLKDYFSKFG DVVDCTLKLD PITGRSRGFG 120
FVLFKESESV DKVMDQKEHK LNGKVIDPKR AKAMKTKEPV KKIFVGGLSP DTPEEKIREY 180
FGGFGEVESI ELPMDNKTNK RRGFCFITFK EEEPVKKIME KKYHNVGLSK CEIKVAMSKE 240
QYQQQQQWGS RGGFAGRARG RGGGPSQNWN QGYSNYWNQG YGSYGYNSQG YGGYGGYDYT 300
GYNSYYGYGD YSNQQSGYGK VSRRGGHQNS YKPY 334 
Gene Ontology
 GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW.
 GO:0003676; F:nucleic acid binding; IEA:UniProtKB-KW.
 GO:0000166; F:nucleotide binding; IEA:InterPro. 
Interpro
 IPR012956; CARG-binding_factor_N.
 IPR012677; Nucleotide-bd_a/b_plait.
 IPR000504; RRM_dom. 
Pfam
 PF08143; CBFNT
 PF00076; RRM_1 
SMART
 SM00360; RRM 
PROSITE
 PS50102; RRM 
PRINTS