CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-003801
UniProt Accession
Genbank Protein ID
 X13905 
Genbank Nucleotide ID
Protein Name
 Ras-related protein Rab-1B 
Protein Synonyms/Alias
  
Gene Name
 Rab1b 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Rattus norvegicus (Rat) 
NCBI Taxa ID
 10116 
Lysine Modification
Position
Peptide
Type
References
116YASENVNKLLVGNKSubiquitination[1]
Reference
 [1] Synaptic protein ubiquitination in rat brain revealed by antibody-based ubiquitome analysis.
 Na CH, Jones DR, Yang Y, Wang X, Xu Y, Peng J.
 J Proteome Res. 2012 Sep 7;11(9):4722-32. [PMID: 22871113
Functional Description
 Protein transport. Regulates vesicular transport between the endoplasmic reticulum and successive Golgi compartments. 
Sequence Annotation
 NP_BIND 15 22 GTP (By similarity).
 NP_BIND 63 67 GTP (By similarity).
 NP_BIND 121 124 GTP (By similarity).
 REGION 64 83 Switch 2 region; required for interaction
 MOTIF 37 45 Effector region (By similarity).
 MOD_RES 1 1 N-acetylmethionine (By similarity).
 MOD_RES 76 76 O-(2-cholinephosphoryl)serine (By
 MOD_RES 201 201 Cysteine methyl ester (Potential).
 LIPID 200 200 S-geranylgeranyl cysteine.
 LIPID 201 201 S-geranylgeranyl cysteine.  
Keyword
 Acetylation; Complete proteome; Cytoplasm; GTP-binding; Lipoprotein; Membrane; Methylation; Nucleotide-binding; Phosphoprotein; Prenylation; Protein transport; Reference proteome; Transport. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 201 AA 
Protein Sequence
MNPEYDYLFK LLLIGDSGVG KSCLLLRFAD DTYTESYIST IGVDFKIRTI ELDGKTIKLQ 60
IWDTAGQERF RTVTSSYYRG AHGIIVVYDV TDQESYANVK QWLQEIDRYA SENVNKLLVG 120
NKSDLTTKKV VDNTTAKEFA DSLGVPFLET SAKNATNVEQ AFMTMAAEIK KRMGPGAASG 180
GERPNLKIDS TPVKSASGGC C 201 
Gene Ontology
 GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
 GO:0016020; C:membrane; IEA:UniProtKB-SubCell.
 GO:0005525; F:GTP binding; ISS:UniProtKB.
 GO:0015031; P:protein transport; IEA:UniProtKB-KW.
 GO:0007264; P:small GTPase mediated signal transduction; IEA:InterPro. 
Interpro
 IPR027417; P-loop_NTPase.
 IPR005225; Small_GTP-bd_dom.
 IPR001806; Small_GTPase.
 IPR003579; Small_GTPase_Rab_type. 
Pfam
 PF00071; Ras 
SMART
 SM00175; RAB 
PROSITE
 PS51419; RAB 
PRINTS
 PR00449; RASTRNSFRMNG.