CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-032261
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Protein transport protein Sec24B 
Protein Synonyms/Alias
 SEC24B protein 
Gene Name
 SEC24B 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
581PNLNADLKKLNCSPDubiquitination[1, 2]
582NLNADLKKLNCSPDSubiquitination[1, 2]
606QTQALLNKAKLPLGLubiquitination[1]
608QALLNKAKLPLGLLLubiquitination[1]
655FIDQRRWKCNLCYRVubiquitination[1]
879GPATDFYKKLALDCSacetylation[3]
880PATDFYKKLALDCSGubiquitination[1]
947LKRYLTRKIGFEAVMubiquitination[1]
1177VPQPPLQKLSAEKLTubiquitination[1, 2]
1182LQKLSAEKLTREGAFubiquitination[1]
Reference
 [1] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961]
 [2] Integrated proteomic analysis of post-translational modifications by serial enrichment.
 Mertins P, Qiao JW, Patel J, Udeshi ND, Clauser KR, Mani DR, Burgess MW, Gillette MA, Jaffe JD, Carr SA.
 Nat Methods. 2013 Jul;10(7):634-7. [PMID: 23749302]
 [3] Proteomic investigations of lysine acetylation identify diverse substrates of mitochondrial deacetylase sirt3.
 Sol EM, Wagner SA, Weinert BT, Kumar A, Kim HS, Deng CX, Choudhary C.
 PLoS One. 2012;7(12):e50545. [PMID: 23236377
Functional Description
  
Sequence Annotation
  
Keyword
 Complete proteome; Protein transport; Reference proteome; Transport. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 1298 AA 
Protein Sequence
MSAPAGSSHP AASARIPPKF GGAAVSGAAA PAGPGAGPAP HQQNETGFHH VAQASLELLD 60
PSNLPASASQ IAGSTGPAQN QMQVPSGYGL HHQNYIAPSG HYSQGPGKMT SLPLDTQCGD 120
YYSALYTVPT QNVTPNTVNQ QPGAQQLYSR GPPAPHIVGS TLGSFQGAAS SASHLHTSAS 180
QPYSSFVNHY NSPAMYSASS SVASQGFPST CGHYAMSTVS NAAYPSVSYP SLPAGDTYGQ 240
MFTSQNAPTV RPVKDNSFSG QNTAISHPSP LPPLPSQQHH QQQSLSGYST LTWSSPGLPS 300
TQDNLIRNHT GSLAVANNNP TITVADSLSC PVMQNVQPPK SSPVVSTVLS GSSGSSSTRT 360
PPTANHPVEP VTSVTQPSEL LQQKGVQYGE YVNNQASSAP TPLSSTSDDE EEEEEDEEAG 420
VDSSSTTSSA SPMPNSYDAL EGGSYPDMLS SSASSPAPDP APEPDPASAP APASAPAPVV 480
PQPSKMAKPF GYGYPTLQPG YQNATAPLIS GVQPSNPVYS GFQQYPQYPG VNQLSSSIGG 540
LSLQSSPQPE SLRPVNLTQE RNILPMTPVW APVPNLNADL KKLNCSPDSF RCTLTNIPQT 600
QALLNKAKLP LGLLLHPFRD LTQLPVITSN TIVRCRSCRT YINPFVSFID QRRWKCNLCY 660
RVNDVPEEFM YNPLTRSYGE PHKRPEVQNS TVEFIASSDY MLRPPQPAVY LFVLDVSHNA 720
VEAGYLTILC QSLLENLDKL PGDSRTRIGF MTFDSTIHFY NLQEGLSQPQ MLIVSDIDDV 780
FLPTPDSLLV NLYESKELIK DLLNALPNMF TNTRETHSAL GPALQAAFKL MSPTGGRVSV 840
FQTQLPSLGA GLLQSREDPN QRSSTKVVQH LGPATDFYKK LALDCSGQQT AVDLFLLSSQ 900
YSDLASLACM SKYSAGCIYY YPSFHYTHNP SQAEKLQKDL KRYLTRKIGF EAVMRIRCTK 960
GLSMHTFHGN FFVRSTDLLS LANINPDAGF AVQLSIEESL TDTSLVCFQT ALLYTSSKGE 1020
RRIRVHTLCL PVVSSLADVY AGVDVQAAIC LLANMAVDRS VSSSLSDARD ALVNAVVDSL 1080
SAYGSTVSNL QHSALMAPSS LKLFPLYVLA LLKQKAFRTG TSTRLDDRVY AMCQIKSQPL 1140
VHLMKMIHPN LYRIDRLTDE GAVHVNDRIV PQPPLQKLSA EKLTREGAFL MDCGSVFYIW 1200
VGKGCDNNFI EDVLGYTNFA SIPQKMTHLP ELDTLSSERA RSFITWLRDS RPLSPILHIV 1260
KDESPAKAEF FQHLIEDRTE AAFSYYEFLL HVQQQICK 1298 
Gene Ontology
 GO:0030127; C:COPII vesicle coat; IEA:InterPro.
 GO:0008270; F:zinc ion binding; IEA:InterPro.
 GO:0006888; P:ER to Golgi vesicle-mediated transport; IEA:InterPro.
 GO:0006886; P:intracellular protein transport; IEA:InterPro. 
Interpro
 IPR007123; Gelsolin_dom.
 IPR006900; Sec23/24_helical_dom.
 IPR006896; Sec23/24_trunk_dom.
 IPR012990; Sec23_24_beta_S.
 IPR002035; VWF_A.
 IPR006895; Znf_Sec23_Sec24. 
Pfam
 PF00626; Gelsolin
 PF08033; Sec23_BS
 PF04815; Sec23_helical
 PF04811; Sec23_trunk
 PF04810; zf-Sec23_Sec24 
SMART
  
PROSITE
  
PRINTS